Gene : Ciclev10020792m.g C. clementina v1.0
Defline:  (1 of 1) PTHR12358:SF43 - SPHINGOID LONG-CHAIN BASES KINASE 2, MITOCHONDRIAL Genomic Order:  4142
Name:  ? Ciclev10020792m.g Secondary Identifier:  ? PAC:20807281
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina PWY-7039 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10020792m.g 0.5kb upstream 0.5kb upstream 5356 true scaffold_3: 48723501-48728856 Citrus clementina
Ciclev10020792m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 48723501-48724000 Citrus clementina
Ciclev10020792m.g 0.5kb downstream 0.5kb downstream 5356 true scaffold_3: 48724001-48729356 Citrus clementina
Ciclev10020792m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 48728857-48729356 Citrus clementina
Ciclev10020792m.g 1.0kb upstream 1.0kb upstream 5856 true scaffold_3: 48723001-48728856 Citrus clementina
Ciclev10020792m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 48723001-48724000 Citrus clementina
Ciclev10020792m.g 1.0kb downstream 1.0kb downstream 5856 true scaffold_3: 48724001-48729856 Citrus clementina
Ciclev10020792m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 48728857-48729856 Citrus clementina
Ciclev10020792m.g 2.0kb upstream 2.0kb upstream 6856 true scaffold_3: 48722001-48728856 Citrus clementina
Ciclev10020792m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 48722001-48724000 Citrus clementina
Ciclev10020792m.g 2.0kb downstream 2.0kb downstream 6856 true scaffold_3: 48724001-48730856 Citrus clementina
Ciclev10020792m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 48728857-48730856 Citrus clementina
Ciclev10020792m.g 5.0kb upstream 5.0kb upstream 9856 true scaffold_3: 48719001-48728856 Citrus clementina
Ciclev10020792m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 48719001-48724000 Citrus clementina
Ciclev10020792m.g 5.0kb downstream 5.0kb downstream 9856 true scaffold_3: 48724001-48733856 Citrus clementina
Ciclev10020792m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 48728857-48733856 Citrus clementina
Ciclev10020792m.g 10.0kb upstream 10.0kb upstream 14856 true scaffold_3: 48714001-48728856 Citrus clementina
Ciclev10020792m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 48714001-48724000 Citrus clementina
Ciclev10020792m.g 10.0kb downstream 10.0kb downstream 14856 true scaffold_3: 48724001-48738856 Citrus clementina
Ciclev10020792m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 48728857-48738856 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124343149 5266 SBM View MSA
124237255 5268 Malvidae View MSA
124062992 5270 Rosid View MSA
123747106 5271 Pentapetalae View MSA
122789016 5272 Eudicot View MSA
122043667 5273 Angiosperm View MSA
121344203 5274 Embryophyte View MSA
123380000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain