Gene : Ciclev10027116m.g C. clementina v1.0
Defline:  (1 of 3) PF02900 - Catalytic LigB subunit of aromatic ring-opening dioxygenase (LigB) Genomic Order:  752
Name:  ? Ciclev10027116m.g Secondary Identifier:  ? PAC:20799545
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10027116m.g 0.5kb upstream 0.5kb upstream 1520 true scaffold_7: 5744091-5745610 Citrus clementina
Ciclev10027116m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 5744091-5744590 Citrus clementina
Ciclev10027116m.g 0.5kb downstream 0.5kb downstream 1520 true scaffold_7: 5744591-5746110 Citrus clementina
Ciclev10027116m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 5745611-5746110 Citrus clementina
Ciclev10027116m.g 1.0kb upstream 1.0kb upstream 2020 true scaffold_7: 5743591-5745610 Citrus clementina
Ciclev10027116m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 5743591-5744590 Citrus clementina
Ciclev10027116m.g 1.0kb downstream 1.0kb downstream 2020 true scaffold_7: 5744591-5746610 Citrus clementina
Ciclev10027116m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 5745611-5746610 Citrus clementina
Ciclev10027116m.g 2.0kb upstream 2.0kb upstream 3020 true scaffold_7: 5742591-5745610 Citrus clementina
Ciclev10027116m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 5742591-5744590 Citrus clementina
Ciclev10027116m.g 2.0kb downstream 2.0kb downstream 3020 true scaffold_7: 5744591-5747610 Citrus clementina
Ciclev10027116m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 5745611-5747610 Citrus clementina
Ciclev10027116m.g 5.0kb upstream 5.0kb upstream 6020 true scaffold_7: 5739591-5745610 Citrus clementina
Ciclev10027116m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 5739591-5744590 Citrus clementina
Ciclev10027116m.g 5.0kb downstream 5.0kb downstream 6020 true scaffold_7: 5744591-5750610 Citrus clementina
Ciclev10027116m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 5745611-5750610 Citrus clementina
Ciclev10027116m.g 10.0kb upstream 10.0kb upstream 11020 true scaffold_7: 5734591-5745610 Citrus clementina
Ciclev10027116m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 5734591-5744590 Citrus clementina
Ciclev10027116m.g 10.0kb downstream 10.0kb downstream 11020 true scaffold_7: 5744591-5755610 Citrus clementina
Ciclev10027116m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 5745611-5755610 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121533771 5273 Angiosperm View MSA
124333541 5266 SBM View MSA
124178695 5268 Malvidae View MSA
123901190 5270 Rosid View MSA
123483025 5271 Pentapetalae View MSA
122518275 5272 Eudicot View MSA
120806533 5274 Embryophyte View MSA
122848086 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain