Gene : Ciclev10008969m.g C. clementina v1.0
Defline:  (1 of 1) PTHR22763:SF50 - E3 UBIQUITIN-PROTEIN LIGASE AIP2 Genomic Order:  1931
Name:  ? Ciclev10008969m.g Secondary Identifier:  ? PAC:20794944
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina PWY-7511 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10008969m.g 0.5kb upstream 0.5kb upstream 2981 true scaffold_1: 25094505-25097485 Citrus clementina
Ciclev10008969m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 25094505-25095004 Citrus clementina
Ciclev10008969m.g 0.5kb downstream 0.5kb downstream 2981 true scaffold_1: 25095005-25097985 Citrus clementina
Ciclev10008969m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 25097486-25097985 Citrus clementina
Ciclev10008969m.g 1.0kb upstream 1.0kb upstream 3481 true scaffold_1: 25094005-25097485 Citrus clementina
Ciclev10008969m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 25094005-25095004 Citrus clementina
Ciclev10008969m.g 1.0kb downstream 1.0kb downstream 3481 true scaffold_1: 25095005-25098485 Citrus clementina
Ciclev10008969m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 25097486-25098485 Citrus clementina
Ciclev10008969m.g 2.0kb upstream 2.0kb upstream 4481 true scaffold_1: 25093005-25097485 Citrus clementina
Ciclev10008969m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 25093005-25095004 Citrus clementina
Ciclev10008969m.g 2.0kb downstream 2.0kb downstream 4481 true scaffold_1: 25095005-25099485 Citrus clementina
Ciclev10008969m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 25097486-25099485 Citrus clementina
Ciclev10008969m.g 5.0kb upstream 5.0kb upstream 7481 true scaffold_1: 25090005-25097485 Citrus clementina
Ciclev10008969m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 25090005-25095004 Citrus clementina
Ciclev10008969m.g 5.0kb downstream 5.0kb downstream 7481 true scaffold_1: 25095005-25102485 Citrus clementina
Ciclev10008969m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 25097486-25102485 Citrus clementina
Ciclev10008969m.g 10.0kb upstream 10.0kb upstream 12481 true scaffold_1: 25085005-25097485 Citrus clementina
Ciclev10008969m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 25085005-25095004 Citrus clementina
Ciclev10008969m.g 10.0kb downstream 10.0kb downstream 12481 true scaffold_1: 25095005-25107485 Citrus clementina
Ciclev10008969m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 25097486-25107485 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026169 5273 Angiosperm View MSA
124342804 5266 SBM View MSA
124243056 5268 Malvidae View MSA
124060743 5270 Rosid View MSA
123738156 5271 Pentapetalae View MSA
122787757 5272 Eudicot View MSA
123429130 5275 Viridiplantae View MSA
121350344 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain