Gene : Ciclev10008204m.g C. clementina v1.0
Defline:  (1 of 1) PTHR10314:SF98 - TRYPTOPHAN SYNTHASE BETA CHAIN 1, CHLOROPLASTIC-RELATED Genomic Order:  1451
Name:  ? Ciclev10008204m.g Secondary Identifier:  ? PAC:20793720
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina TRPSYN-PWY Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10008204m.g 0.5kb upstream 0.5kb upstream 3244 true scaffold_1: 21412806-21416049 Citrus clementina
Ciclev10008204m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 21415550-21416049 Citrus clementina
Ciclev10008204m.g 0.5kb downstream 0.5kb downstream 3244 true scaffold_1: 21412306-21415549 Citrus clementina
Ciclev10008204m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 21412306-21412805 Citrus clementina
Ciclev10008204m.g 1.0kb upstream 1.0kb upstream 3744 true scaffold_1: 21412806-21416549 Citrus clementina
Ciclev10008204m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 21415550-21416549 Citrus clementina
Ciclev10008204m.g 1.0kb downstream 1.0kb downstream 3744 true scaffold_1: 21411806-21415549 Citrus clementina
Ciclev10008204m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 21411806-21412805 Citrus clementina
Ciclev10008204m.g 2.0kb upstream 2.0kb upstream 4744 true scaffold_1: 21412806-21417549 Citrus clementina
Ciclev10008204m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 21415550-21417549 Citrus clementina
Ciclev10008204m.g 2.0kb downstream 2.0kb downstream 4744 true scaffold_1: 21410806-21415549 Citrus clementina
Ciclev10008204m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 21410806-21412805 Citrus clementina
Ciclev10008204m.g 5.0kb upstream 5.0kb upstream 7744 true scaffold_1: 21412806-21420549 Citrus clementina
Ciclev10008204m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 21415550-21420549 Citrus clementina
Ciclev10008204m.g 5.0kb downstream 5.0kb downstream 7744 true scaffold_1: 21407806-21415549 Citrus clementina
Ciclev10008204m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 21407806-21412805 Citrus clementina
Ciclev10008204m.g 10.0kb upstream 10.0kb upstream 12744 true scaffold_1: 21412806-21425549 Citrus clementina
Ciclev10008204m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 21415550-21425549 Citrus clementina
Ciclev10008204m.g 10.0kb downstream 10.0kb downstream 12744 true scaffold_1: 21402806-21415549 Citrus clementina
Ciclev10008204m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 21402806-21412805 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124344388 5266 SBM View MSA
124250400 5268 Malvidae View MSA
124062384 5270 Rosid View MSA
123745831 5271 Pentapetalae View MSA
122787401 5272 Eudicot View MSA
122044231 5273 Angiosperm View MSA
121344651 5274 Embryophyte View MSA
123423776 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain