Gene : Ciclev10008682m.g C. clementina v1.0
Defline:  (1 of 1) 5.3.1.23 - S-methyl-5-thioribose-1-phosphate isomerase / S-methyl-5-thio-D-ribose-1-phosphate aldose-ketose-isomerase Genomic Order:  1852
Name:  ? Ciclev10008682m.g Secondary Identifier:  ? PAC:20795160
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina PWY-4361 Citrus clementina pathologic  
Cclementina PWY-7270 Citrus clementina pathologic  
Cclementina PWY-7528 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10008682m.g 0.5kb upstream 0.5kb upstream 4130 true scaffold_1: 24541002-24545131 Citrus clementina
Ciclev10008682m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 24544632-24545131 Citrus clementina
Ciclev10008682m.g 0.5kb downstream 0.5kb downstream 4130 true scaffold_1: 24540502-24544631 Citrus clementina
Ciclev10008682m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 24540502-24541001 Citrus clementina
Ciclev10008682m.g 1.0kb upstream 1.0kb upstream 4630 true scaffold_1: 24541002-24545631 Citrus clementina
Ciclev10008682m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 24544632-24545631 Citrus clementina
Ciclev10008682m.g 1.0kb downstream 1.0kb downstream 4630 true scaffold_1: 24540002-24544631 Citrus clementina
Ciclev10008682m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 24540002-24541001 Citrus clementina
Ciclev10008682m.g 2.0kb upstream 2.0kb upstream 5630 true scaffold_1: 24541002-24546631 Citrus clementina
Ciclev10008682m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 24544632-24546631 Citrus clementina
Ciclev10008682m.g 2.0kb downstream 2.0kb downstream 5630 true scaffold_1: 24539002-24544631 Citrus clementina
Ciclev10008682m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 24539002-24541001 Citrus clementina
Ciclev10008682m.g 5.0kb upstream 5.0kb upstream 8630 true scaffold_1: 24541002-24549631 Citrus clementina
Ciclev10008682m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 24544632-24549631 Citrus clementina
Ciclev10008682m.g 5.0kb downstream 5.0kb downstream 8630 true scaffold_1: 24536002-24544631 Citrus clementina
Ciclev10008682m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 24536002-24541001 Citrus clementina
Ciclev10008682m.g 10.0kb upstream 10.0kb upstream 13630 true scaffold_1: 24541002-24554631 Citrus clementina
Ciclev10008682m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 24544632-24554631 Citrus clementina
Ciclev10008682m.g 10.0kb downstream 10.0kb downstream 13630 true scaffold_1: 24531002-24544631 Citrus clementina
Ciclev10008682m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 24531002-24541001 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124345905 5266 SBM View MSA
124238790 5268 Malvidae View MSA
124060423 5270 Rosid View MSA
123740094 5271 Pentapetalae View MSA
122788864 5272 Eudicot View MSA
122043863 5273 Angiosperm View MSA
121310201 5274 Embryophyte View MSA
123428305 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain