Gene : Ciclev10009191m.g C. clementina v1.0
Defline:  (1 of 2) 5.4.99.5 - Chorismate mutase / Hydroxyphenylpyruvate synthase Genomic Order:  139
Name:  ? Ciclev10009191m.g Secondary Identifier:  ? PAC:20793585
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina PWY-3461 Citrus clementina pathologic  
Cclementina PWY-3462 Citrus clementina pathologic  
Cclementina PWY-3481 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10009191m.g 0.5kb upstream 0.5kb upstream 3447 true scaffold_1: 1016171-1019617 Citrus clementina
Ciclev10009191m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 1019118-1019617 Citrus clementina
Ciclev10009191m.g 0.5kb downstream 0.5kb downstream 3447 true scaffold_1: 1015671-1019117 Citrus clementina
Ciclev10009191m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 1015671-1016170 Citrus clementina
Ciclev10009191m.g 1.0kb upstream 1.0kb upstream 3947 true scaffold_1: 1016171-1020117 Citrus clementina
Ciclev10009191m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 1019118-1020117 Citrus clementina
Ciclev10009191m.g 1.0kb downstream 1.0kb downstream 3947 true scaffold_1: 1015171-1019117 Citrus clementina
Ciclev10009191m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 1015171-1016170 Citrus clementina
Ciclev10009191m.g 2.0kb upstream 2.0kb upstream 4947 true scaffold_1: 1016171-1021117 Citrus clementina
Ciclev10009191m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 1019118-1021117 Citrus clementina
Ciclev10009191m.g 2.0kb downstream 2.0kb downstream 4947 true scaffold_1: 1014171-1019117 Citrus clementina
Ciclev10009191m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 1014171-1016170 Citrus clementina
Ciclev10009191m.g 5.0kb upstream 5.0kb upstream 7947 true scaffold_1: 1016171-1024117 Citrus clementina
Ciclev10009191m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 1019118-1024117 Citrus clementina
Ciclev10009191m.g 5.0kb downstream 5.0kb downstream 7947 true scaffold_1: 1011171-1019117 Citrus clementina
Ciclev10009191m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 1011171-1016170 Citrus clementina
Ciclev10009191m.g 10.0kb upstream 10.0kb upstream 12947 true scaffold_1: 1016171-1029117 Citrus clementina
Ciclev10009191m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 1019118-1029117 Citrus clementina
Ciclev10009191m.g 10.0kb downstream 10.0kb downstream 12947 true scaffold_1: 1006171-1019117 Citrus clementina
Ciclev10009191m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 1006171-1016170 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124338638 5266 SBM View MSA
124239132 5268 Malvidae View MSA
124062994 5270 Rosid View MSA
123742772 5271 Pentapetalae View MSA
122797161 5272 Eudicot View MSA
122050627 5273 Angiosperm View MSA
121312036 5274 Embryophyte View MSA
123427559 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain