Gene : Ciclev10010440m.g C. clementina v1.0
Defline:  (1 of 26) 3.2.1.15 - Polygalacturonase / Pectinase Genomic Order:  239
Name:  ? Ciclev10010440m.g Secondary Identifier:  ? PAC:20795750
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina PWY-1081 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10010440m.g 0.5kb upstream 0.5kb upstream 3683 true scaffold_1: 1886150-1889832 Citrus clementina
Ciclev10010440m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 1886150-1886649 Citrus clementina
Ciclev10010440m.g 0.5kb downstream 0.5kb downstream 3683 true scaffold_1: 1886650-1890332 Citrus clementina
Ciclev10010440m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 1889833-1890332 Citrus clementina
Ciclev10010440m.g 1.0kb upstream 1.0kb upstream 4183 true scaffold_1: 1885650-1889832 Citrus clementina
Ciclev10010440m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 1885650-1886649 Citrus clementina
Ciclev10010440m.g 1.0kb downstream 1.0kb downstream 4183 true scaffold_1: 1886650-1890832 Citrus clementina
Ciclev10010440m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 1889833-1890832 Citrus clementina
Ciclev10010440m.g 2.0kb upstream 2.0kb upstream 5183 true scaffold_1: 1884650-1889832 Citrus clementina
Ciclev10010440m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 1884650-1886649 Citrus clementina
Ciclev10010440m.g 2.0kb downstream 2.0kb downstream 5183 true scaffold_1: 1886650-1891832 Citrus clementina
Ciclev10010440m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 1889833-1891832 Citrus clementina
Ciclev10010440m.g 5.0kb upstream 5.0kb upstream 8183 true scaffold_1: 1881650-1889832 Citrus clementina
Ciclev10010440m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 1881650-1886649 Citrus clementina
Ciclev10010440m.g 5.0kb downstream 5.0kb downstream 8183 true scaffold_1: 1886650-1894832 Citrus clementina
Ciclev10010440m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 1889833-1894832 Citrus clementina
Ciclev10010440m.g 10.0kb upstream 10.0kb upstream 13183 true scaffold_1: 1876650-1889832 Citrus clementina
Ciclev10010440m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 1876650-1886649 Citrus clementina
Ciclev10010440m.g 10.0kb downstream 10.0kb downstream 13183 true scaffold_1: 1886650-1899832 Citrus clementina
Ciclev10010440m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 1889833-1899832 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124351120 5266 SBM View MSA
124249641 5268 Malvidae View MSA
124070803 5270 Rosid View MSA
123753570 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain