Gene : Ciclev10007571m.g C. clementina v1.0
Defline:  (1 of 3) PTHR13301:SF60 - CELLULOSE SYNTHASE-LIKE PROTEIN E1 Genomic Order:  1722
Name:  ? Ciclev10007571m.g Secondary Identifier:  ? PAC:20793737
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina PWY-1001 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10007571m.g 0.5kb upstream 0.5kb upstream 3921 true scaffold_1: 23581313-23585233 Citrus clementina
Ciclev10007571m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 23584734-23585233 Citrus clementina
Ciclev10007571m.g 0.5kb downstream 0.5kb downstream 3921 true scaffold_1: 23580813-23584733 Citrus clementina
Ciclev10007571m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 23580813-23581312 Citrus clementina
Ciclev10007571m.g 1.0kb upstream 1.0kb upstream 4421 true scaffold_1: 23581313-23585733 Citrus clementina
Ciclev10007571m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 23584734-23585733 Citrus clementina
Ciclev10007571m.g 1.0kb downstream 1.0kb downstream 4421 true scaffold_1: 23580313-23584733 Citrus clementina
Ciclev10007571m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 23580313-23581312 Citrus clementina
Ciclev10007571m.g 2.0kb upstream 2.0kb upstream 5421 true scaffold_1: 23581313-23586733 Citrus clementina
Ciclev10007571m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 23584734-23586733 Citrus clementina
Ciclev10007571m.g 2.0kb downstream 2.0kb downstream 5421 true scaffold_1: 23579313-23584733 Citrus clementina
Ciclev10007571m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 23579313-23581312 Citrus clementina
Ciclev10007571m.g 5.0kb upstream 5.0kb upstream 8421 true scaffold_1: 23581313-23589733 Citrus clementina
Ciclev10007571m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 23584734-23589733 Citrus clementina
Ciclev10007571m.g 5.0kb downstream 5.0kb downstream 8421 true scaffold_1: 23576313-23584733 Citrus clementina
Ciclev10007571m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 23576313-23581312 Citrus clementina
Ciclev10007571m.g 10.0kb upstream 10.0kb upstream 13421 true scaffold_1: 23581313-23594733 Citrus clementina
Ciclev10007571m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 23584734-23594733 Citrus clementina
Ciclev10007571m.g 10.0kb downstream 10.0kb downstream 13421 true scaffold_1: 23571313-23584733 Citrus clementina
Ciclev10007571m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 23571313-23581312 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124339465 5266 SBM View MSA
124237130 5268 Malvidae View MSA
124070260 5270 Rosid View MSA
123753400 5271 Pentapetalae View MSA
122797245 5272 Eudicot View MSA
122051318 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain