Gene : Ciclev10008224m.g C. clementina v1.0
Defline:  (1 of 1) PTHR11879:SF1 - ASPARTATE AMINOTRANSFERASE, CHLOROPLASTIC Genomic Order:  174
Name:  ? Ciclev10008224m.g Secondary Identifier:  ? PAC:20794270
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina ASPARTATE-DEG1-PWY Citrus clementina pathologic  
Cclementina ASPARTATESYN-PWY Citrus clementina pathologic  
Cclementina PWY-3001 Citrus clementina pathologic  
Cclementina PWY-7115 Citrus clementina pathologic  
Cclementina PWY-7117 Citrus clementina pathologic  
Cclementina THRESYN-PWY Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10008224m.g 0.5kb upstream 0.5kb upstream 5005 true scaffold_1: 1401342-1406346 Citrus clementina
Ciclev10008224m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 1401342-1401841 Citrus clementina
Ciclev10008224m.g 0.5kb downstream 0.5kb downstream 5005 true scaffold_1: 1401842-1406846 Citrus clementina
Ciclev10008224m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 1406347-1406846 Citrus clementina
Ciclev10008224m.g 1.0kb upstream 1.0kb upstream 5505 true scaffold_1: 1400842-1406346 Citrus clementina
Ciclev10008224m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 1400842-1401841 Citrus clementina
Ciclev10008224m.g 1.0kb downstream 1.0kb downstream 5505 true scaffold_1: 1401842-1407346 Citrus clementina
Ciclev10008224m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 1406347-1407346 Citrus clementina
Ciclev10008224m.g 2.0kb upstream 2.0kb upstream 6505 true scaffold_1: 1399842-1406346 Citrus clementina
Ciclev10008224m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 1399842-1401841 Citrus clementina
Ciclev10008224m.g 2.0kb downstream 2.0kb downstream 6505 true scaffold_1: 1401842-1408346 Citrus clementina
Ciclev10008224m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 1406347-1408346 Citrus clementina
Ciclev10008224m.g 5.0kb upstream 5.0kb upstream 9505 true scaffold_1: 1396842-1406346 Citrus clementina
Ciclev10008224m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 1396842-1401841 Citrus clementina
Ciclev10008224m.g 5.0kb downstream 5.0kb downstream 9505 true scaffold_1: 1401842-1411346 Citrus clementina
Ciclev10008224m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 1406347-1411346 Citrus clementina
Ciclev10008224m.g 10.0kb upstream 10.0kb upstream 14505 true scaffold_1: 1391842-1406346 Citrus clementina
Ciclev10008224m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 1391842-1401841 Citrus clementina
Ciclev10008224m.g 10.0kb downstream 10.0kb downstream 14505 true scaffold_1: 1401842-1416346 Citrus clementina
Ciclev10008224m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 1406347-1416346 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124341327 5266 SBM View MSA
124241276 5268 Malvidae View MSA
124066749 5270 Rosid View MSA
123740507 5271 Pentapetalae View MSA
122797537 5272 Eudicot View MSA
122048100 5273 Angiosperm View MSA
121346908 5274 Embryophyte View MSA
123424622 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain