Gene : Ciclev10010551m.g C. clementina v1.0
Defline:  (1 of 1) PTHR10543//PTHR10543:SF30 - BETA-CAROTENE DIOXYGENASE Genomic Order:  404
Name:  ? Ciclev10010551m.g Secondary Identifier:  ? PAC:20794580
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina PWY-695 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10010551m.g 0.5kb upstream 0.5kb upstream 4471 true scaffold_1: 3113083-3117553 Citrus clementina
Ciclev10010551m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 3117054-3117553 Citrus clementina
Ciclev10010551m.g 0.5kb downstream 0.5kb downstream 4471 true scaffold_1: 3112583-3117053 Citrus clementina
Ciclev10010551m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 3112583-3113082 Citrus clementina
Ciclev10010551m.g 1.0kb upstream 1.0kb upstream 4971 true scaffold_1: 3113083-3118053 Citrus clementina
Ciclev10010551m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 3117054-3118053 Citrus clementina
Ciclev10010551m.g 1.0kb downstream 1.0kb downstream 4971 true scaffold_1: 3112083-3117053 Citrus clementina
Ciclev10010551m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 3112083-3113082 Citrus clementina
Ciclev10010551m.g 2.0kb upstream 2.0kb upstream 5971 true scaffold_1: 3113083-3119053 Citrus clementina
Ciclev10010551m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 3117054-3119053 Citrus clementina
Ciclev10010551m.g 2.0kb downstream 2.0kb downstream 5971 true scaffold_1: 3111083-3117053 Citrus clementina
Ciclev10010551m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 3111083-3113082 Citrus clementina
Ciclev10010551m.g 5.0kb upstream 5.0kb upstream 8971 true scaffold_1: 3113083-3122053 Citrus clementina
Ciclev10010551m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 3117054-3122053 Citrus clementina
Ciclev10010551m.g 5.0kb downstream 5.0kb downstream 8971 true scaffold_1: 3108083-3117053 Citrus clementina
Ciclev10010551m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 3108083-3113082 Citrus clementina
Ciclev10010551m.g 10.0kb upstream 10.0kb upstream 13971 true scaffold_1: 3113083-3127053 Citrus clementina
Ciclev10010551m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 3117054-3127053 Citrus clementina
Ciclev10010551m.g 10.0kb downstream 10.0kb downstream 13971 true scaffold_1: 3103083-3117053 Citrus clementina
Ciclev10010551m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 3103083-3113082 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124347076 5266 SBM View MSA
124246521 5268 Malvidae View MSA
124074147 5270 Rosid View MSA
123748697 5271 Pentapetalae View MSA
122795171 5272 Eudicot View MSA
122051607 5273 Angiosperm View MSA
121349725 5274 Embryophyte View MSA
123381417 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain