Gene : Ciclev10014944m.g C. clementina v1.0
Defline:  (1 of 2) 2.3.3.1 - Citrate (Si)-synthase / Citrate oxaloacetate-lyase ((pro-3S)-CH(2)COO->acetyl-CoA) Genomic Order:  1808
Name:  ? Ciclev10014944m.g Secondary Identifier:  ? PAC:20816229
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina GLYOXYLATE-BYPASS Citrus clementina pathologic  
Cclementina PWY-5464 Citrus clementina pathologic  
Cclementina PWY-561 Citrus clementina pathologic  
Cclementina PWY-5690 Citrus clementina pathologic  
Cclementina PWY-6549 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10014944m.g 0.5kb upstream 0.5kb upstream 4940 true scaffold_2: 26011086-26016025 Citrus clementina
Ciclev10014944m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 26011086-26011585 Citrus clementina
Ciclev10014944m.g 0.5kb downstream 0.5kb downstream 4940 true scaffold_2: 26011586-26016525 Citrus clementina
Ciclev10014944m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 26016026-26016525 Citrus clementina
Ciclev10014944m.g 1.0kb upstream 1.0kb upstream 5440 true scaffold_2: 26010586-26016025 Citrus clementina
Ciclev10014944m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 26010586-26011585 Citrus clementina
Ciclev10014944m.g 1.0kb downstream 1.0kb downstream 5440 true scaffold_2: 26011586-26017025 Citrus clementina
Ciclev10014944m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 26016026-26017025 Citrus clementina
Ciclev10014944m.g 2.0kb upstream 2.0kb upstream 6440 true scaffold_2: 26009586-26016025 Citrus clementina
Ciclev10014944m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 26009586-26011585 Citrus clementina
Ciclev10014944m.g 2.0kb downstream 2.0kb downstream 6440 true scaffold_2: 26011586-26018025 Citrus clementina
Ciclev10014944m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 26016026-26018025 Citrus clementina
Ciclev10014944m.g 5.0kb upstream 5.0kb upstream 9440 true scaffold_2: 26006586-26016025 Citrus clementina
Ciclev10014944m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 26006586-26011585 Citrus clementina
Ciclev10014944m.g 5.0kb downstream 5.0kb downstream 9440 true scaffold_2: 26011586-26021025 Citrus clementina
Ciclev10014944m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 26016026-26021025 Citrus clementina
Ciclev10014944m.g 10.0kb upstream 10.0kb upstream 14440 true scaffold_2: 26001586-26016025 Citrus clementina
Ciclev10014944m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 26001586-26011585 Citrus clementina
Ciclev10014944m.g 10.0kb downstream 10.0kb downstream 14440 true scaffold_2: 26011586-26026025 Citrus clementina
Ciclev10014944m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 26016026-26026025 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124345629 5266 SBM View MSA
124251480 5268 Malvidae View MSA
124065792 5270 Rosid View MSA
123748183 5271 Pentapetalae View MSA
122794190 5272 Eudicot View MSA
122044026 5273 Angiosperm View MSA
121344650 5274 Embryophyte View MSA
123424100 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain