Gene : Ciclev10014206m.g C. clementina v1.0
Defline:  (1 of 1) PTHR23163:SF0 - E3 UBIQUITIN-PROTEIN LIGASE BRE1 Genomic Order:  200
Name:  ? Ciclev10014206m.g Secondary Identifier:  ? PAC:20815949
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina PWY-7511 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10014206m.g 0.5kb upstream 0.5kb upstream 12643 true scaffold_2: 4499414-4512056 Citrus clementina
Ciclev10014206m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 4511557-4512056 Citrus clementina
Ciclev10014206m.g 0.5kb downstream 0.5kb downstream 12643 true scaffold_2: 4498914-4511556 Citrus clementina
Ciclev10014206m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 4498914-4499413 Citrus clementina
Ciclev10014206m.g 1.0kb upstream 1.0kb upstream 13143 true scaffold_2: 4499414-4512556 Citrus clementina
Ciclev10014206m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 4511557-4512556 Citrus clementina
Ciclev10014206m.g 1.0kb downstream 1.0kb downstream 13143 true scaffold_2: 4498414-4511556 Citrus clementina
Ciclev10014206m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 4498414-4499413 Citrus clementina
Ciclev10014206m.g 2.0kb upstream 2.0kb upstream 14143 true scaffold_2: 4499414-4513556 Citrus clementina
Ciclev10014206m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 4511557-4513556 Citrus clementina
Ciclev10014206m.g 2.0kb downstream 2.0kb downstream 14143 true scaffold_2: 4497414-4511556 Citrus clementina
Ciclev10014206m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 4497414-4499413 Citrus clementina
Ciclev10014206m.g 5.0kb upstream 5.0kb upstream 17143 true scaffold_2: 4499414-4516556 Citrus clementina
Ciclev10014206m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 4511557-4516556 Citrus clementina
Ciclev10014206m.g 5.0kb downstream 5.0kb downstream 17143 true scaffold_2: 4494414-4511556 Citrus clementina
Ciclev10014206m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 4494414-4499413 Citrus clementina
Ciclev10014206m.g 10.0kb upstream 10.0kb upstream 22143 true scaffold_2: 4499414-4521556 Citrus clementina
Ciclev10014206m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 4511557-4521556 Citrus clementina
Ciclev10014206m.g 10.0kb downstream 10.0kb downstream 22143 true scaffold_2: 4489414-4511556 Citrus clementina
Ciclev10014206m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 4489414-4499413 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124341385 5266 SBM View MSA
124238716 5268 Malvidae View MSA
124068574 5270 Rosid View MSA
123753299 5271 Pentapetalae View MSA
122793673 5272 Eudicot View MSA
122042098 5273 Angiosperm View MSA
121349326 5274 Embryophyte View MSA
123423997 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain