Gene : Ciclev10016896m.g C. clementina v1.0
Defline:  (1 of 17) KOG0417 - Ubiquitin-protein ligase Genomic Order:  69
Name:  ? Ciclev10016896m.g Secondary Identifier:  ? PAC:20818949
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina PWY-7511 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10016896m.g 0.5kb upstream 0.5kb upstream 3409 true scaffold_2: 553135-556543 Citrus clementina
Ciclev10016896m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 556044-556543 Citrus clementina
Ciclev10016896m.g 0.5kb downstream 0.5kb downstream 3409 true scaffold_2: 552635-556043 Citrus clementina
Ciclev10016896m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 552635-553134 Citrus clementina
Ciclev10016896m.g 1.0kb upstream 1.0kb upstream 3909 true scaffold_2: 553135-557043 Citrus clementina
Ciclev10016896m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 556044-557043 Citrus clementina
Ciclev10016896m.g 1.0kb downstream 1.0kb downstream 3909 true scaffold_2: 552135-556043 Citrus clementina
Ciclev10016896m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 552135-553134 Citrus clementina
Ciclev10016896m.g 2.0kb upstream 2.0kb upstream 4909 true scaffold_2: 553135-558043 Citrus clementina
Ciclev10016896m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 556044-558043 Citrus clementina
Ciclev10016896m.g 2.0kb downstream 2.0kb downstream 4909 true scaffold_2: 551135-556043 Citrus clementina
Ciclev10016896m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 551135-553134 Citrus clementina
Ciclev10016896m.g 5.0kb upstream 5.0kb upstream 7909 true scaffold_2: 553135-561043 Citrus clementina
Ciclev10016896m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 556044-561043 Citrus clementina
Ciclev10016896m.g 5.0kb downstream 5.0kb downstream 7909 true scaffold_2: 548135-556043 Citrus clementina
Ciclev10016896m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 548135-553134 Citrus clementina
Ciclev10016896m.g 10.0kb upstream 10.0kb upstream 12909 true scaffold_2: 553135-566043 Citrus clementina
Ciclev10016896m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 556044-566043 Citrus clementina
Ciclev10016896m.g 10.0kb downstream 10.0kb downstream 12909 true scaffold_2: 543135-556043 Citrus clementina
Ciclev10016896m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 543135-553134 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124345309 5266 SBM View MSA
124237855 5268 Malvidae View MSA
124072408 5270 Rosid View MSA
123751143 5271 Pentapetalae View MSA
122796795 5272 Eudicot View MSA
122049643 5273 Angiosperm View MSA
121351650 5274 Embryophyte View MSA
123428086 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain