Gene : Ciclev10017621m.g C. clementina v1.0
Defline:  (1 of 9) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  3084
Name:  ? Ciclev10017621m.g Secondary Identifier:  ? PAC:20819211
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10017621m.g 0.5kb upstream 0.5kb upstream 1640 true scaffold_2: 35746022-35747661 Citrus clementina
Ciclev10017621m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 35746022-35746521 Citrus clementina
Ciclev10017621m.g 0.5kb downstream 0.5kb downstream 1640 true scaffold_2: 35746522-35748161 Citrus clementina
Ciclev10017621m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 35747662-35748161 Citrus clementina
Ciclev10017621m.g 1.0kb upstream 1.0kb upstream 2140 true scaffold_2: 35745522-35747661 Citrus clementina
Ciclev10017621m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 35745522-35746521 Citrus clementina
Ciclev10017621m.g 1.0kb downstream 1.0kb downstream 2140 true scaffold_2: 35746522-35748661 Citrus clementina
Ciclev10017621m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 35747662-35748661 Citrus clementina
Ciclev10017621m.g 2.0kb upstream 2.0kb upstream 3140 true scaffold_2: 35744522-35747661 Citrus clementina
Ciclev10017621m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 35744522-35746521 Citrus clementina
Ciclev10017621m.g 2.0kb downstream 2.0kb downstream 3140 true scaffold_2: 35746522-35749661 Citrus clementina
Ciclev10017621m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 35747662-35749661 Citrus clementina
Ciclev10017621m.g 5.0kb upstream 5.0kb upstream 6140 true scaffold_2: 35741522-35747661 Citrus clementina
Ciclev10017621m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 35741522-35746521 Citrus clementina
Ciclev10017621m.g 5.0kb downstream 5.0kb downstream 6140 true scaffold_2: 35746522-35752661 Citrus clementina
Ciclev10017621m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 35747662-35752661 Citrus clementina
Ciclev10017621m.g 10.0kb upstream 10.0kb upstream 11140 true scaffold_2: 35736522-35747661 Citrus clementina
Ciclev10017621m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 35736522-35746521 Citrus clementina
Ciclev10017621m.g 10.0kb downstream 10.0kb downstream 11140 true scaffold_2: 35746522-35757661 Citrus clementina
Ciclev10017621m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 35747662-35757661 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124351148 5266 SBM View MSA
124250408 5268 Malvidae View MSA
124074816 5270 Rosid View MSA
123749229 5271 Pentapetalae View MSA
122795391 5272 Eudicot View MSA
122048165 5273 Angiosperm View MSA
121344169 5274 Embryophyte View MSA
123379991 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain