Gene : Ciclev10031073m.g C. clementina v1.0
Defline:  (1 of 1) PTHR16263:SF4 - TETRATRICOPEPTIDE REPEAT PROTEIN 38 Genomic Order:  2124
Name:  ? Ciclev10031073m.g Secondary Identifier:  ? PAC:20805254
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina PWY-6842 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10031073m.g 0.5kb upstream 0.5kb upstream 8931 true scaffold_4: 23404432-23413362 Citrus clementina
Ciclev10031073m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 23404432-23404931 Citrus clementina
Ciclev10031073m.g 0.5kb downstream 0.5kb downstream 8931 true scaffold_4: 23404932-23413862 Citrus clementina
Ciclev10031073m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 23413363-23413862 Citrus clementina
Ciclev10031073m.g 1.0kb upstream 1.0kb upstream 9431 true scaffold_4: 23403932-23413362 Citrus clementina
Ciclev10031073m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 23403932-23404931 Citrus clementina
Ciclev10031073m.g 1.0kb downstream 1.0kb downstream 9431 true scaffold_4: 23404932-23414362 Citrus clementina
Ciclev10031073m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 23413363-23414362 Citrus clementina
Ciclev10031073m.g 2.0kb upstream 2.0kb upstream 10431 true scaffold_4: 23402932-23413362 Citrus clementina
Ciclev10031073m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 23402932-23404931 Citrus clementina
Ciclev10031073m.g 2.0kb downstream 2.0kb downstream 10431 true scaffold_4: 23404932-23415362 Citrus clementina
Ciclev10031073m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 23413363-23415362 Citrus clementina
Ciclev10031073m.g 5.0kb upstream 5.0kb upstream 13431 true scaffold_4: 23399932-23413362 Citrus clementina
Ciclev10031073m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 23399932-23404931 Citrus clementina
Ciclev10031073m.g 5.0kb downstream 5.0kb downstream 13431 true scaffold_4: 23404932-23418362 Citrus clementina
Ciclev10031073m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 23413363-23418362 Citrus clementina
Ciclev10031073m.g 10.0kb upstream 10.0kb upstream 18431 true scaffold_4: 23394932-23413362 Citrus clementina
Ciclev10031073m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 23394932-23404931 Citrus clementina
Ciclev10031073m.g 10.0kb downstream 10.0kb downstream 18431 true scaffold_4: 23404932-23423362 Citrus clementina
Ciclev10031073m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 23413363-23423362 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124338528 5266 SBM View MSA
124240073 5268 Malvidae View MSA
124066695 5270 Rosid View MSA
123740616 5271 Pentapetalae View MSA
122790919 5272 Eudicot View MSA
122043704 5273 Angiosperm View MSA
121346225 5274 Embryophyte View MSA
123380350 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain