Gene : Ciclev10031547m.g C. clementina v1.0
Defline:  (1 of 1) 4.2.3.5 - Chorismate synthase / 5-enolpyruvylshikimate-3-phosphate phospholyase Genomic Order:  535
Name:  ? Ciclev10031547m.g Secondary Identifier:  ? PAC:20803252
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina ARO-PWY Citrus clementina pathologic  
Cclementina PWY-6163 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10031547m.g 0.5kb upstream 0.5kb upstream 6763 true scaffold_4: 4077557-4084319 Citrus clementina
Ciclev10031547m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 4083820-4084319 Citrus clementina
Ciclev10031547m.g 0.5kb downstream 0.5kb downstream 6763 true scaffold_4: 4077057-4083819 Citrus clementina
Ciclev10031547m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 4077057-4077556 Citrus clementina
Ciclev10031547m.g 1.0kb upstream 1.0kb upstream 7263 true scaffold_4: 4077557-4084819 Citrus clementina
Ciclev10031547m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 4083820-4084819 Citrus clementina
Ciclev10031547m.g 1.0kb downstream 1.0kb downstream 7263 true scaffold_4: 4076557-4083819 Citrus clementina
Ciclev10031547m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 4076557-4077556 Citrus clementina
Ciclev10031547m.g 2.0kb upstream 2.0kb upstream 8263 true scaffold_4: 4077557-4085819 Citrus clementina
Ciclev10031547m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 4083820-4085819 Citrus clementina
Ciclev10031547m.g 2.0kb downstream 2.0kb downstream 8263 true scaffold_4: 4075557-4083819 Citrus clementina
Ciclev10031547m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 4075557-4077556 Citrus clementina
Ciclev10031547m.g 5.0kb upstream 5.0kb upstream 11263 true scaffold_4: 4077557-4088819 Citrus clementina
Ciclev10031547m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 4083820-4088819 Citrus clementina
Ciclev10031547m.g 5.0kb downstream 5.0kb downstream 11263 true scaffold_4: 4072557-4083819 Citrus clementina
Ciclev10031547m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 4072557-4077556 Citrus clementina
Ciclev10031547m.g 10.0kb upstream 10.0kb upstream 16263 true scaffold_4: 4077557-4093819 Citrus clementina
Ciclev10031547m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 4083820-4093819 Citrus clementina
Ciclev10031547m.g 10.0kb downstream 10.0kb downstream 16263 true scaffold_4: 4067557-4083819 Citrus clementina
Ciclev10031547m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 4067557-4077556 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041230 5273 Angiosperm View MSA
124346296 5266 SBM View MSA
124238630 5268 Malvidae View MSA
124061876 5270 Rosid View MSA
123747909 5271 Pentapetalae View MSA
122787011 5272 Eudicot View MSA
121346403 5274 Embryophyte View MSA
123428194 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain