Gene : Ciclev10033386m.g C. clementina v1.0
Defline:  (1 of 1) PTHR31375:SF28 - POLYGALACTURONASE QRT2 Genomic Order:  2470
Name:  ? Ciclev10033386m.g Secondary Identifier:  ? PAC:20805705
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina PWY-1081 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10033386m.g 0.5kb upstream 0.5kb upstream 2847 true scaffold_4: 25493771-25496617 Citrus clementina
Ciclev10033386m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 25496118-25496617 Citrus clementina
Ciclev10033386m.g 0.5kb downstream 0.5kb downstream 2847 true scaffold_4: 25493271-25496117 Citrus clementina
Ciclev10033386m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 25493271-25493770 Citrus clementina
Ciclev10033386m.g 1.0kb upstream 1.0kb upstream 3347 true scaffold_4: 25493771-25497117 Citrus clementina
Ciclev10033386m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 25496118-25497117 Citrus clementina
Ciclev10033386m.g 1.0kb downstream 1.0kb downstream 3347 true scaffold_4: 25492771-25496117 Citrus clementina
Ciclev10033386m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 25492771-25493770 Citrus clementina
Ciclev10033386m.g 2.0kb upstream 2.0kb upstream 4347 true scaffold_4: 25493771-25498117 Citrus clementina
Ciclev10033386m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 25496118-25498117 Citrus clementina
Ciclev10033386m.g 2.0kb downstream 2.0kb downstream 4347 true scaffold_4: 25491771-25496117 Citrus clementina
Ciclev10033386m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 25491771-25493770 Citrus clementina
Ciclev10033386m.g 5.0kb upstream 5.0kb upstream 7347 true scaffold_4: 25493771-25501117 Citrus clementina
Ciclev10033386m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 25496118-25501117 Citrus clementina
Ciclev10033386m.g 5.0kb downstream 5.0kb downstream 7347 true scaffold_4: 25488771-25496117 Citrus clementina
Ciclev10033386m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 25488771-25493770 Citrus clementina
Ciclev10033386m.g 10.0kb upstream 10.0kb upstream 12347 true scaffold_4: 25493771-25506117 Citrus clementina
Ciclev10033386m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 25496118-25506117 Citrus clementina
Ciclev10033386m.g 10.0kb downstream 10.0kb downstream 12347 true scaffold_4: 25483771-25496117 Citrus clementina
Ciclev10033386m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 25483771-25493770 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124338536 5266 SBM View MSA
124237828 5268 Malvidae View MSA
124073768 5270 Rosid View MSA
123750458 5271 Pentapetalae View MSA
122794874 5272 Eudicot View MSA
122047278 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain