Gene : Ciclev10032510m.g C. clementina v1.0
Defline:  (1 of 3) PTHR31843:SF2 - ALLENE OXIDE CYCLASE 1, CHLOROPLASTIC-RELATED Genomic Order:  1600
Name:  ? Ciclev10032510m.g Secondary Identifier:  ? PAC:20802930
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina PWY-735 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10032510m.g 0.5kb upstream 0.5kb upstream 1657 true scaffold_4: 19622200-19623856 Citrus clementina
Ciclev10032510m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 19623357-19623856 Citrus clementina
Ciclev10032510m.g 0.5kb downstream 0.5kb downstream 1657 true scaffold_4: 19621700-19623356 Citrus clementina
Ciclev10032510m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 19621700-19622199 Citrus clementina
Ciclev10032510m.g 1.0kb upstream 1.0kb upstream 2157 true scaffold_4: 19622200-19624356 Citrus clementina
Ciclev10032510m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 19623357-19624356 Citrus clementina
Ciclev10032510m.g 1.0kb downstream 1.0kb downstream 2157 true scaffold_4: 19621200-19623356 Citrus clementina
Ciclev10032510m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 19621200-19622199 Citrus clementina
Ciclev10032510m.g 2.0kb upstream 2.0kb upstream 3157 true scaffold_4: 19622200-19625356 Citrus clementina
Ciclev10032510m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 19623357-19625356 Citrus clementina
Ciclev10032510m.g 2.0kb downstream 2.0kb downstream 3157 true scaffold_4: 19620200-19623356 Citrus clementina
Ciclev10032510m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 19620200-19622199 Citrus clementina
Ciclev10032510m.g 5.0kb upstream 5.0kb upstream 6157 true scaffold_4: 19622200-19628356 Citrus clementina
Ciclev10032510m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 19623357-19628356 Citrus clementina
Ciclev10032510m.g 5.0kb downstream 5.0kb downstream 6157 true scaffold_4: 19617200-19623356 Citrus clementina
Ciclev10032510m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 19617200-19622199 Citrus clementina
Ciclev10032510m.g 10.0kb upstream 10.0kb upstream 11157 true scaffold_4: 19622200-19633356 Citrus clementina
Ciclev10032510m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 19623357-19633356 Citrus clementina
Ciclev10032510m.g 10.0kb downstream 10.0kb downstream 11157 true scaffold_4: 19612200-19623356 Citrus clementina
Ciclev10032510m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 19612200-19622199 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124339249 5266 SBM View MSA
124252758 5268 Malvidae View MSA
124066771 5270 Rosid View MSA
123739753 5271 Pentapetalae View MSA
122789032 5272 Eudicot View MSA
122045897 5273 Angiosperm View MSA
121350459 5274 Embryophyte View MSA
123426138 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain