Gene : Ciclev10031821m.g C. clementina v1.0
Defline:  (1 of 2) PTHR21499:SF33 - HOMOSERINE DEHYDROGENASE Genomic Order:  2127
Name:  ? Ciclev10031821m.g Secondary Identifier:  ? PAC:20805442
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina HOMOSERSYN-PWY Citrus clementina pathologic  
Cclementina PWY-3001 Citrus clementina pathologic  
Cclementina PWY-724 Citrus clementina pathologic  
Cclementina THRESYN-PWY Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10031821m.g 0.5kb upstream 0.5kb upstream 6749 true scaffold_4: 23418500-23425248 Citrus clementina
Ciclev10031821m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 23418500-23418999 Citrus clementina
Ciclev10031821m.g 0.5kb downstream 0.5kb downstream 6749 true scaffold_4: 23419000-23425748 Citrus clementina
Ciclev10031821m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 23425249-23425748 Citrus clementina
Ciclev10031821m.g 1.0kb upstream 1.0kb upstream 7249 true scaffold_4: 23418000-23425248 Citrus clementina
Ciclev10031821m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 23418000-23418999 Citrus clementina
Ciclev10031821m.g 1.0kb downstream 1.0kb downstream 7249 true scaffold_4: 23419000-23426248 Citrus clementina
Ciclev10031821m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 23425249-23426248 Citrus clementina
Ciclev10031821m.g 2.0kb upstream 2.0kb upstream 8249 true scaffold_4: 23417000-23425248 Citrus clementina
Ciclev10031821m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 23417000-23418999 Citrus clementina
Ciclev10031821m.g 2.0kb downstream 2.0kb downstream 8249 true scaffold_4: 23419000-23427248 Citrus clementina
Ciclev10031821m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 23425249-23427248 Citrus clementina
Ciclev10031821m.g 5.0kb upstream 5.0kb upstream 11249 true scaffold_4: 23414000-23425248 Citrus clementina
Ciclev10031821m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 23414000-23418999 Citrus clementina
Ciclev10031821m.g 5.0kb downstream 5.0kb downstream 11249 true scaffold_4: 23419000-23430248 Citrus clementina
Ciclev10031821m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 23425249-23430248 Citrus clementina
Ciclev10031821m.g 10.0kb upstream 10.0kb upstream 16249 true scaffold_4: 23409000-23425248 Citrus clementina
Ciclev10031821m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 23409000-23418999 Citrus clementina
Ciclev10031821m.g 10.0kb downstream 10.0kb downstream 16249 true scaffold_4: 23419000-23435248 Citrus clementina
Ciclev10031821m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 23425249-23435248 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124336802 5266 SBM View MSA
124242430 5268 Malvidae View MSA
124062775 5270 Rosid View MSA
123740432 5271 Pentapetalae View MSA
122769980 5272 Eudicot View MSA
122043747 5273 Angiosperm View MSA
121349256 5274 Embryophyte View MSA
123424216 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain