Gene : Ciclev10031220m.g C. clementina v1.0
Defline:  (1 of 1) PTHR31375:SF46 - PECTIN LYASE-LIKE PROTEIN Genomic Order:  2007
Name:  ? Ciclev10031220m.g Secondary Identifier:  ? PAC:20805302
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina PWY-1081 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10031220m.g 0.5kb upstream 0.5kb upstream 5460 true scaffold_4: 22576817-22582276 Citrus clementina
Ciclev10031220m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 22576817-22577316 Citrus clementina
Ciclev10031220m.g 0.5kb downstream 0.5kb downstream 5460 true scaffold_4: 22577317-22582776 Citrus clementina
Ciclev10031220m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 22582277-22582776 Citrus clementina
Ciclev10031220m.g 1.0kb upstream 1.0kb upstream 5960 true scaffold_4: 22576317-22582276 Citrus clementina
Ciclev10031220m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 22576317-22577316 Citrus clementina
Ciclev10031220m.g 1.0kb downstream 1.0kb downstream 5960 true scaffold_4: 22577317-22583276 Citrus clementina
Ciclev10031220m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 22582277-22583276 Citrus clementina
Ciclev10031220m.g 2.0kb upstream 2.0kb upstream 6960 true scaffold_4: 22575317-22582276 Citrus clementina
Ciclev10031220m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 22575317-22577316 Citrus clementina
Ciclev10031220m.g 2.0kb downstream 2.0kb downstream 6960 true scaffold_4: 22577317-22584276 Citrus clementina
Ciclev10031220m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 22582277-22584276 Citrus clementina
Ciclev10031220m.g 5.0kb upstream 5.0kb upstream 9960 true scaffold_4: 22572317-22582276 Citrus clementina
Ciclev10031220m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 22572317-22577316 Citrus clementina
Ciclev10031220m.g 5.0kb downstream 5.0kb downstream 9960 true scaffold_4: 22577317-22587276 Citrus clementina
Ciclev10031220m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 22582277-22587276 Citrus clementina
Ciclev10031220m.g 10.0kb upstream 10.0kb upstream 14960 true scaffold_4: 22567317-22582276 Citrus clementina
Ciclev10031220m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 22567317-22577316 Citrus clementina
Ciclev10031220m.g 10.0kb downstream 10.0kb downstream 14960 true scaffold_4: 22577317-22592276 Citrus clementina
Ciclev10031220m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 22582277-22592276 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124342145 5266 SBM View MSA
124241872 5268 Malvidae View MSA
124069047 5270 Rosid View MSA
123746876 5271 Pentapetalae View MSA
122793930 5272 Eudicot View MSA
122049793 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain