Gene : Ciclev10005375m.g C. clementina v1.0

Defline:  (1 of 1) PTHR19919:SF2 - PROTEIN TRANSPARENT TESTA GLABRA 1 Genomic Order:  310
Name:  ? Ciclev10005375m.g Secondary Identifier:  ? PAC:20791097

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10005375m.g 0.5kb upstream 0.5kb upstream 2004 true scaffold_9: 2118684-2120687 Citrus clementina
Ciclev10005375m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 2118684-2119183 Citrus clementina
Ciclev10005375m.g 0.5kb downstream 0.5kb downstream 2004 true scaffold_9: 2119184-2121187 Citrus clementina
Ciclev10005375m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 2120688-2121187 Citrus clementina
Ciclev10005375m.g 1.0kb upstream 1.0kb upstream 2504 true scaffold_9: 2118184-2120687 Citrus clementina
Ciclev10005375m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 2118184-2119183 Citrus clementina
Ciclev10005375m.g 1.0kb downstream 1.0kb downstream 2504 true scaffold_9: 2119184-2121687 Citrus clementina
Ciclev10005375m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 2120688-2121687 Citrus clementina
Ciclev10005375m.g 2.0kb upstream 2.0kb upstream 3504 true scaffold_9: 2117184-2120687 Citrus clementina
Ciclev10005375m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 2117184-2119183 Citrus clementina
Ciclev10005375m.g 2.0kb downstream 2.0kb downstream 3504 true scaffold_9: 2119184-2122687 Citrus clementina
Ciclev10005375m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 2120688-2122687 Citrus clementina
Ciclev10005375m.g 5.0kb upstream 5.0kb upstream 6504 true scaffold_9: 2114184-2120687 Citrus clementina
Ciclev10005375m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 2114184-2119183 Citrus clementina
Ciclev10005375m.g 5.0kb downstream 5.0kb downstream 6504 true scaffold_9: 2119184-2125687 Citrus clementina
Ciclev10005375m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 2120688-2125687 Citrus clementina
Ciclev10005375m.g 10.0kb upstream 10.0kb upstream 11504 true scaffold_9: 2109184-2120687 Citrus clementina
Ciclev10005375m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 2109184-2119183 Citrus clementina
Ciclev10005375m.g 10.0kb downstream 10.0kb downstream 11504 true scaffold_9: 2119184-2130687 Citrus clementina
Ciclev10005375m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 2120688-2130687 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124341460 5266 SBM View MSA
124253509 5268 Malvidae View MSA
124066004 5270 Rosid View MSA
123745660 5271 Pentapetalae View MSA
122791660 5272 Eudicot View MSA
122050418 5273 Angiosperm View MSA
121348109 5274 Embryophyte View MSA
123423806 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain