Gene : Ciclev10005458m.g C. clementina v1.0
Defline:  (1 of 1) 2.5.1.55 - 3-deoxy-8-phosphooctulonate synthase / Phospho-2-keto-3-deoxyoctonate aldolase Genomic Order:  2294
Name:  ? Ciclev10005458m.g Secondary Identifier:  ? PAC:20792229
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina PWY-1269 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10005458m.g 0.5kb upstream 0.5kb upstream 4705 true scaffold_9: 30894620-30899324 Citrus clementina
Ciclev10005458m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 30894620-30895119 Citrus clementina
Ciclev10005458m.g 0.5kb downstream 0.5kb downstream 4705 true scaffold_9: 30895120-30899824 Citrus clementina
Ciclev10005458m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 30899325-30899824 Citrus clementina
Ciclev10005458m.g 1.0kb upstream 1.0kb upstream 5205 true scaffold_9: 30894120-30899324 Citrus clementina
Ciclev10005458m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 30894120-30895119 Citrus clementina
Ciclev10005458m.g 1.0kb downstream 1.0kb downstream 5205 true scaffold_9: 30895120-30900324 Citrus clementina
Ciclev10005458m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 30899325-30900324 Citrus clementina
Ciclev10005458m.g 2.0kb upstream 2.0kb upstream 6205 true scaffold_9: 30893120-30899324 Citrus clementina
Ciclev10005458m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 30893120-30895119 Citrus clementina
Ciclev10005458m.g 2.0kb downstream 2.0kb downstream 6205 true scaffold_9: 30895120-30901324 Citrus clementina
Ciclev10005458m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 30899325-30901324 Citrus clementina
Ciclev10005458m.g 5.0kb upstream 5.0kb upstream 9205 true scaffold_9: 30890120-30899324 Citrus clementina
Ciclev10005458m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 30890120-30895119 Citrus clementina
Ciclev10005458m.g 5.0kb downstream 5.0kb downstream 9205 true scaffold_9: 30895120-30904324 Citrus clementina
Ciclev10005458m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 30899325-30904324 Citrus clementina
Ciclev10005458m.g 10.0kb upstream 10.0kb upstream 14205 true scaffold_9: 30885120-30899324 Citrus clementina
Ciclev10005458m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 30885120-30895119 Citrus clementina
Ciclev10005458m.g 10.0kb downstream 10.0kb downstream 14205 true scaffold_9: 30895120-30909324 Citrus clementina
Ciclev10005458m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 30899325-30909324 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124345040 5266 SBM View MSA
124244021 5268 Malvidae View MSA
124065016 5270 Rosid View MSA
123738710 5271 Pentapetalae View MSA
122788202 5272 Eudicot View MSA
122050140 5273 Angiosperm View MSA
121346522 5274 Embryophyte View MSA
123424720 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain