Gene : Ciclev10005481m.g C. clementina v1.0
Defline:  (1 of 2) 1.14.13.129 - Beta-carotene 3-hydroxylase / Beta-carotene 3,3'-monooxygenase Genomic Order:  2131
Name:  ? Ciclev10005481m.g Secondary Identifier:  ? PAC:20790438
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina CAROTENOID-PWY Citrus clementina pathologic  
Cclementina PWY-5944 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10005481m.g 0.5kb upstream 0.5kb upstream 3024 true scaffold_9: 29488658-29491681 Citrus clementina
Ciclev10005481m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 29491182-29491681 Citrus clementina
Ciclev10005481m.g 0.5kb downstream 0.5kb downstream 3024 true scaffold_9: 29488158-29491181 Citrus clementina
Ciclev10005481m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 29488158-29488657 Citrus clementina
Ciclev10005481m.g 1.0kb upstream 1.0kb upstream 3524 true scaffold_9: 29488658-29492181 Citrus clementina
Ciclev10005481m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 29491182-29492181 Citrus clementina
Ciclev10005481m.g 1.0kb downstream 1.0kb downstream 3524 true scaffold_9: 29487658-29491181 Citrus clementina
Ciclev10005481m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 29487658-29488657 Citrus clementina
Ciclev10005481m.g 2.0kb upstream 2.0kb upstream 4524 true scaffold_9: 29488658-29493181 Citrus clementina
Ciclev10005481m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 29491182-29493181 Citrus clementina
Ciclev10005481m.g 2.0kb downstream 2.0kb downstream 4524 true scaffold_9: 29486658-29491181 Citrus clementina
Ciclev10005481m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 29486658-29488657 Citrus clementina
Ciclev10005481m.g 5.0kb upstream 5.0kb upstream 7524 true scaffold_9: 29488658-29496181 Citrus clementina
Ciclev10005481m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 29491182-29496181 Citrus clementina
Ciclev10005481m.g 5.0kb downstream 5.0kb downstream 7524 true scaffold_9: 29483658-29491181 Citrus clementina
Ciclev10005481m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 29483658-29488657 Citrus clementina
Ciclev10005481m.g 10.0kb upstream 10.0kb upstream 12524 true scaffold_9: 29488658-29501181 Citrus clementina
Ciclev10005481m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 29491182-29501181 Citrus clementina
Ciclev10005481m.g 10.0kb downstream 10.0kb downstream 12524 true scaffold_9: 29478658-29491181 Citrus clementina
Ciclev10005481m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 29478658-29488657 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124338230 5266 SBM View MSA
124251518 5268 Malvidae View MSA
124066838 5270 Rosid View MSA
123749049 5271 Pentapetalae View MSA
122787521 5272 Eudicot View MSA
122046641 5273 Angiosperm View MSA
123429104 5275 Viridiplantae View MSA
121351007 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain