Gene : Ciclev10004281m.g C. clementina v1.0
Defline:  (1 of 1) PTHR11771:SF53 - LINOLEATE 9S-LIPOXYGENASE 5, CHLOROPLASTIC Genomic Order:  473
Name:  ? Ciclev10004281m.g Secondary Identifier:  ? PAC:20790063
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina PWY-5409 Citrus clementina pathologic  
Cclementina PWY-5410 Citrus clementina pathologic  
Cclementina PWY-735 Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10004281m.g 0.5kb upstream 0.5kb upstream 5182 true scaffold_9: 3442738-3447919 Citrus clementina
Ciclev10004281m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 3442738-3443237 Citrus clementina
Ciclev10004281m.g 0.5kb downstream 0.5kb downstream 5182 true scaffold_9: 3443238-3448419 Citrus clementina
Ciclev10004281m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 3447920-3448419 Citrus clementina
Ciclev10004281m.g 1.0kb upstream 1.0kb upstream 5682 true scaffold_9: 3442238-3447919 Citrus clementina
Ciclev10004281m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 3442238-3443237 Citrus clementina
Ciclev10004281m.g 1.0kb downstream 1.0kb downstream 5682 true scaffold_9: 3443238-3448919 Citrus clementina
Ciclev10004281m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 3447920-3448919 Citrus clementina
Ciclev10004281m.g 2.0kb upstream 2.0kb upstream 6682 true scaffold_9: 3441238-3447919 Citrus clementina
Ciclev10004281m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 3441238-3443237 Citrus clementina
Ciclev10004281m.g 2.0kb downstream 2.0kb downstream 6682 true scaffold_9: 3443238-3449919 Citrus clementina
Ciclev10004281m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 3447920-3449919 Citrus clementina
Ciclev10004281m.g 5.0kb upstream 5.0kb upstream 9682 true scaffold_9: 3438238-3447919 Citrus clementina
Ciclev10004281m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 3438238-3443237 Citrus clementina
Ciclev10004281m.g 5.0kb downstream 5.0kb downstream 9682 true scaffold_9: 3443238-3452919 Citrus clementina
Ciclev10004281m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 3447920-3452919 Citrus clementina
Ciclev10004281m.g 10.0kb upstream 10.0kb upstream 14682 true scaffold_9: 3433238-3447919 Citrus clementina
Ciclev10004281m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 3433238-3443237 Citrus clementina
Ciclev10004281m.g 10.0kb downstream 10.0kb downstream 14682 true scaffold_9: 3443238-3457919 Citrus clementina
Ciclev10004281m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 3447920-3457919 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122793975 5272 Eudicot View MSA
124344316 5266 SBM View MSA
124245222 5268 Malvidae View MSA
124071703 5270 Rosid View MSA
123743828 5271 Pentapetalae View MSA
122049504 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain