Gene : Ciclev10004615m.g C. clementina v1.0
Defline:  (1 of 3) 1.1.1.86 - Ketol-acid reductoisomerase (NADP(+)) / Dihydroxyisovalerate dehydrogenase (isomerizing) Genomic Order:  1861
Name:  ? Ciclev10004615m.g Secondary Identifier:  ? PAC:20790346
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cclementina BRANCHED-CHAIN-AA-SYN-PWY Citrus clementina pathologic  
Cclementina ILEUSYN-PWY Citrus clementina pathologic  
Cclementina PWY-3001 Citrus clementina pathologic  
Cclementina VALSYN-PWY Citrus clementina pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Ciclev10004615m.g 0.5kb upstream 0.5kb upstream 4087 true scaffold_9: 27242398-27246484 Citrus clementina
Ciclev10004615m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 27245985-27246484 Citrus clementina
Ciclev10004615m.g 0.5kb downstream 0.5kb downstream 4087 true scaffold_9: 27241898-27245984 Citrus clementina
Ciclev10004615m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 27241898-27242397 Citrus clementina
Ciclev10004615m.g 1.0kb upstream 1.0kb upstream 4587 true scaffold_9: 27242398-27246984 Citrus clementina
Ciclev10004615m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 27245985-27246984 Citrus clementina
Ciclev10004615m.g 1.0kb downstream 1.0kb downstream 4587 true scaffold_9: 27241398-27245984 Citrus clementina
Ciclev10004615m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 27241398-27242397 Citrus clementina
Ciclev10004615m.g 2.0kb upstream 2.0kb upstream 5587 true scaffold_9: 27242398-27247984 Citrus clementina
Ciclev10004615m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 27245985-27247984 Citrus clementina
Ciclev10004615m.g 2.0kb downstream 2.0kb downstream 5587 true scaffold_9: 27240398-27245984 Citrus clementina
Ciclev10004615m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 27240398-27242397 Citrus clementina
Ciclev10004615m.g 5.0kb upstream 5.0kb upstream 8587 true scaffold_9: 27242398-27250984 Citrus clementina
Ciclev10004615m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 27245985-27250984 Citrus clementina
Ciclev10004615m.g 5.0kb downstream 5.0kb downstream 8587 true scaffold_9: 27237398-27245984 Citrus clementina
Ciclev10004615m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 27237398-27242397 Citrus clementina
Ciclev10004615m.g 10.0kb upstream 10.0kb upstream 13587 true scaffold_9: 27242398-27255984 Citrus clementina
Ciclev10004615m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 27245985-27255984 Citrus clementina
Ciclev10004615m.g 10.0kb downstream 10.0kb downstream 13587 true scaffold_9: 27232398-27245984 Citrus clementina
Ciclev10004615m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 27232398-27242397 Citrus clementina

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124339638 5266 SBM View MSA
124249053 5268 Malvidae View MSA
124060504 5270 Rosid View MSA
123749649 5271 Pentapetalae View MSA
122794973 5272 Eudicot View MSA
122043531 5273 Angiosperm View MSA
121344443 5274 Embryophyte View MSA
123428276 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain