Gene : Lus10013739.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR10315:SF45 - E3 UBIQUITIN-PROTEIN LIGASE Genomic Order:  64
Name:  ? Lus10013739.g Secondary Identifier:  ? PAC:23169039
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-7511 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10013739.g 0.5kb upstream 0.5kb upstream 1723 true scaffold1168: 274381-276103 Linum usitatissimum
Lus10013739.g 0.5kb upstream 0.5kb upstream 500 false scaffold1168: 275604-276103 Linum usitatissimum
Lus10013739.g 0.5kb downstream 0.5kb downstream 1723 true scaffold1168: 273881-275603 Linum usitatissimum
Lus10013739.g 0.5kb downstream 0.5kb downstream 500 false scaffold1168: 273881-274380 Linum usitatissimum
Lus10013739.g 1.0kb upstream 1.0kb upstream 2223 true scaffold1168: 274381-276603 Linum usitatissimum
Lus10013739.g 1.0kb upstream 1.0kb upstream 1000 false scaffold1168: 275604-276603 Linum usitatissimum
Lus10013739.g 1.0kb downstream 1.0kb downstream 2223 true scaffold1168: 273381-275603 Linum usitatissimum
Lus10013739.g 1.0kb downstream 1.0kb downstream 1000 false scaffold1168: 273381-274380 Linum usitatissimum
Lus10013739.g 2.0kb upstream 2.0kb upstream 3223 true scaffold1168: 274381-277603 Linum usitatissimum
Lus10013739.g 2.0kb upstream 2.0kb upstream 2000 false scaffold1168: 275604-277603 Linum usitatissimum
Lus10013739.g 2.0kb downstream 2.0kb downstream 3223 true scaffold1168: 272381-275603 Linum usitatissimum
Lus10013739.g 2.0kb downstream 2.0kb downstream 2000 false scaffold1168: 272381-274380 Linum usitatissimum
Lus10013739.g 5.0kb upstream 5.0kb upstream 6223 true scaffold1168: 274381-280603 Linum usitatissimum
Lus10013739.g 5.0kb upstream 5.0kb upstream 5000 false scaffold1168: 275604-280603 Linum usitatissimum
Lus10013739.g 5.0kb downstream 5.0kb downstream 6223 true scaffold1168: 269381-275603 Linum usitatissimum
Lus10013739.g 5.0kb downstream 5.0kb downstream 5000 false scaffold1168: 269381-274380 Linum usitatissimum
Lus10013739.g 10.0kb upstream 10.0kb upstream 11223 true scaffold1168: 274381-285603 Linum usitatissimum
Lus10013739.g 10.0kb upstream 10.0kb upstream 10000 false scaffold1168: 275604-285603 Linum usitatissimum
Lus10013739.g 10.0kb downstream 10.0kb downstream 11223 true scaffold1168: 264381-275603 Linum usitatissimum
Lus10013739.g 10.0kb downstream 10.0kb downstream 10000 false scaffold1168: 264381-274380 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122461408 5262 Malpighiales View MSA
124246222 5268 Malvidae View MSA
124072834 5270 Rosid View MSA
123746623 5271 Pentapetalae View MSA
122796827 5272 Eudicot View MSA
122050638 5273 Angiosperm View MSA
121350928 5274 Embryophyte View MSA
123381939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain