Gene : Lus10017408.g L. usitatissimum v1.0
Defline:  (1 of 4) 6.1.1.7 - Alanine--tRNA ligase / Alanyl-tRNA synthetase Genomic Order:  107
Name:  ? Lus10017408.g Secondary Identifier:  ? PAC:23140176
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum TRNA-CHARGING-PWY Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10017408.g 0.5kb upstream 0.5kb upstream 18267 true scaffold511: 481452-499718 Linum usitatissimum
Lus10017408.g 0.5kb upstream 0.5kb upstream 500 false scaffold511: 499219-499718 Linum usitatissimum
Lus10017408.g 0.5kb downstream 0.5kb downstream 18267 true scaffold511: 480952-499218 Linum usitatissimum
Lus10017408.g 0.5kb downstream 0.5kb downstream 500 false scaffold511: 480952-481451 Linum usitatissimum
Lus10017408.g 1.0kb upstream 1.0kb upstream 18767 true scaffold511: 481452-500218 Linum usitatissimum
Lus10017408.g 1.0kb upstream 1.0kb upstream 1000 false scaffold511: 499219-500218 Linum usitatissimum
Lus10017408.g 1.0kb downstream 1.0kb downstream 18767 true scaffold511: 480452-499218 Linum usitatissimum
Lus10017408.g 1.0kb downstream 1.0kb downstream 1000 false scaffold511: 480452-481451 Linum usitatissimum
Lus10017408.g 2.0kb upstream 2.0kb upstream 19767 true scaffold511: 481452-501218 Linum usitatissimum
Lus10017408.g 2.0kb upstream 2.0kb upstream 2000 false scaffold511: 499219-501218 Linum usitatissimum
Lus10017408.g 2.0kb downstream 2.0kb downstream 19767 true scaffold511: 479452-499218 Linum usitatissimum
Lus10017408.g 2.0kb downstream 2.0kb downstream 2000 false scaffold511: 479452-481451 Linum usitatissimum
Lus10017408.g 5.0kb upstream 5.0kb upstream 22767 true scaffold511: 481452-504218 Linum usitatissimum
Lus10017408.g 5.0kb upstream 5.0kb upstream 5000 false scaffold511: 499219-504218 Linum usitatissimum
Lus10017408.g 5.0kb downstream 5.0kb downstream 22767 true scaffold511: 476452-499218 Linum usitatissimum
Lus10017408.g 5.0kb downstream 5.0kb downstream 5000 false scaffold511: 476452-481451 Linum usitatissimum
Lus10017408.g 10.0kb upstream 10.0kb upstream 27767 true scaffold511: 481452-509218 Linum usitatissimum
Lus10017408.g 10.0kb upstream 10.0kb upstream 10000 false scaffold511: 499219-509218 Linum usitatissimum
Lus10017408.g 10.0kb downstream 10.0kb downstream 27767 true scaffold511: 471452-499218 Linum usitatissimum
Lus10017408.g 10.0kb downstream 10.0kb downstream 10000 false scaffold511: 471452-481451 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121560580 5273 Angiosperm Singleton cluster - no MSA
122421649 5262 Malpighiales Singleton cluster - no MSA
124213836 5268 Malvidae Singleton cluster - no MSA
123931636 5270 Rosid Singleton cluster - no MSA
123510934 5271 Pentapetalae Singleton cluster - no MSA
122545995 5272 Eudicot Singleton cluster - no MSA
120833154 5274 Embryophyte Singleton cluster - no MSA
122874478 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain