Gene : Lus10012111.g L. usitatissimum v1.0
Defline:  (1 of 6) 1.1.1.42 - Isocitrate dehydrogenase (NADP(+)) / oxalosuccinate carboxylase Genomic Order:  17
Name:  ? Lus10012111.g Secondary Identifier:  ? PAC:23154951
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-6549 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10012111.g 0.5kb upstream 0.5kb upstream 3480 true scaffold1186: 66476-69955 Linum usitatissimum
Lus10012111.g 0.5kb upstream 0.5kb upstream 500 false scaffold1186: 66476-66975 Linum usitatissimum
Lus10012111.g 0.5kb downstream 0.5kb downstream 3480 true scaffold1186: 66976-70455 Linum usitatissimum
Lus10012111.g 0.5kb downstream 0.5kb downstream 500 false scaffold1186: 69956-70455 Linum usitatissimum
Lus10012111.g 1.0kb upstream 1.0kb upstream 3980 true scaffold1186: 65976-69955 Linum usitatissimum
Lus10012111.g 1.0kb upstream 1.0kb upstream 1000 false scaffold1186: 65976-66975 Linum usitatissimum
Lus10012111.g 1.0kb downstream 1.0kb downstream 3980 true scaffold1186: 66976-70955 Linum usitatissimum
Lus10012111.g 1.0kb downstream 1.0kb downstream 1000 false scaffold1186: 69956-70955 Linum usitatissimum
Lus10012111.g 2.0kb upstream 2.0kb upstream 4980 true scaffold1186: 64976-69955 Linum usitatissimum
Lus10012111.g 2.0kb upstream 2.0kb upstream 2000 false scaffold1186: 64976-66975 Linum usitatissimum
Lus10012111.g 2.0kb downstream 2.0kb downstream 4980 true scaffold1186: 66976-71955 Linum usitatissimum
Lus10012111.g 2.0kb downstream 2.0kb downstream 2000 false scaffold1186: 69956-71955 Linum usitatissimum
Lus10012111.g 5.0kb upstream 5.0kb upstream 7980 true scaffold1186: 61976-69955 Linum usitatissimum
Lus10012111.g 5.0kb upstream 5.0kb upstream 5000 false scaffold1186: 61976-66975 Linum usitatissimum
Lus10012111.g 5.0kb downstream 5.0kb downstream 7980 true scaffold1186: 66976-74955 Linum usitatissimum
Lus10012111.g 5.0kb downstream 5.0kb downstream 5000 false scaffold1186: 69956-74955 Linum usitatissimum
Lus10012111.g 10.0kb upstream 10.0kb upstream 12980 true scaffold1186: 56976-69955 Linum usitatissimum
Lus10012111.g 10.0kb upstream 10.0kb upstream 10000 false scaffold1186: 56976-66975 Linum usitatissimum
Lus10012111.g 10.0kb downstream 10.0kb downstream 12980 true scaffold1186: 66976-79955 Linum usitatissimum
Lus10012111.g 10.0kb downstream 10.0kb downstream 10000 false scaffold1186: 69956-79955 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122449724 5262 Malpighiales View MSA
124253615 5268 Malvidae View MSA
124070230 5270 Rosid View MSA
123744673 5271 Pentapetalae View MSA
122792686 5272 Eudicot View MSA
122045414 5273 Angiosperm View MSA
121351363 5274 Embryophyte View MSA
123426624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain