Gene : Lus10027888.g L. usitatissimum v1.0
Defline:  (1 of 8) 2.1.1.104 - Caffeoyl-CoA O-methyltransferase / Trans-caffeoyl-CoA 3-O-methyltransferase Genomic Order:  176
Name:  ? Lus10027888.g Secondary Identifier:  ? PAC:23156999
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-1121 Linum usitatissimum pathologic  
Lusitatissimum PWY-361 Linum usitatissimum pathologic  
Lusitatissimum PWY-7498 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10027888.g 0.5kb upstream 0.5kb upstream 1761 true scaffold1143: 796145-797905 Linum usitatissimum
Lus10027888.g 0.5kb upstream 0.5kb upstream 500 false scaffold1143: 797406-797905 Linum usitatissimum
Lus10027888.g 0.5kb downstream 0.5kb downstream 1761 true scaffold1143: 795645-797405 Linum usitatissimum
Lus10027888.g 0.5kb downstream 0.5kb downstream 500 false scaffold1143: 795645-796144 Linum usitatissimum
Lus10027888.g 1.0kb upstream 1.0kb upstream 2261 true scaffold1143: 796145-798405 Linum usitatissimum
Lus10027888.g 1.0kb upstream 1.0kb upstream 1000 false scaffold1143: 797406-798405 Linum usitatissimum
Lus10027888.g 1.0kb downstream 1.0kb downstream 2261 true scaffold1143: 795145-797405 Linum usitatissimum
Lus10027888.g 1.0kb downstream 1.0kb downstream 1000 false scaffold1143: 795145-796144 Linum usitatissimum
Lus10027888.g 2.0kb upstream 2.0kb upstream 3261 true scaffold1143: 796145-799405 Linum usitatissimum
Lus10027888.g 2.0kb upstream 2.0kb upstream 2000 false scaffold1143: 797406-799405 Linum usitatissimum
Lus10027888.g 2.0kb downstream 2.0kb downstream 3261 true scaffold1143: 794145-797405 Linum usitatissimum
Lus10027888.g 2.0kb downstream 2.0kb downstream 2000 false scaffold1143: 794145-796144 Linum usitatissimum
Lus10027888.g 5.0kb upstream 5.0kb upstream 6261 true scaffold1143: 796145-802405 Linum usitatissimum
Lus10027888.g 5.0kb upstream 5.0kb upstream 5000 false scaffold1143: 797406-802405 Linum usitatissimum
Lus10027888.g 5.0kb downstream 5.0kb downstream 6261 true scaffold1143: 791145-797405 Linum usitatissimum
Lus10027888.g 5.0kb downstream 5.0kb downstream 5000 false scaffold1143: 791145-796144 Linum usitatissimum
Lus10027888.g 10.0kb upstream 10.0kb upstream 11261 true scaffold1143: 796145-807405 Linum usitatissimum
Lus10027888.g 10.0kb upstream 10.0kb upstream 10000 false scaffold1143: 797406-807405 Linum usitatissimum
Lus10027888.g 10.0kb downstream 10.0kb downstream 11261 true scaffold1143: 786145-797405 Linum usitatissimum
Lus10027888.g 10.0kb downstream 10.0kb downstream 10000 false scaffold1143: 786145-796144 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122426079 5262 Malpighiales View MSA
124253255 5268 Malvidae View MSA
124070061 5270 Rosid View MSA
123746911 5271 Pentapetalae View MSA
122790683 5272 Eudicot View MSA
122043643 5273 Angiosperm View MSA
121346702 5274 Embryophyte View MSA
123427843 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain