Gene : Lus10004076.g L. usitatissimum v1.0

Defline:  (1 of 2) PTHR33428:SF2 - CHLOROPHYLLASE-1 Genomic Order:  1
Name:  ? Lus10004076.g Secondary Identifier:  ? PAC:23169968

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-5098 Linum usitatissimum pathologic  
Lusitatissimum PWY-6927 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10004076.g 0.5kb upstream 0.5kb upstream 1891 true scaffold115: 5315-7205 Linum usitatissimum
Lus10004076.g 0.5kb upstream 0.5kb upstream 500 false scaffold115: 6706-7205 Linum usitatissimum
Lus10004076.g 0.5kb downstream 0.5kb downstream 1891 true scaffold115: 4815-6705 Linum usitatissimum
Lus10004076.g 0.5kb downstream 0.5kb downstream 500 false scaffold115: 4815-5314 Linum usitatissimum
Lus10004076.g 1.0kb upstream 1.0kb upstream 2391 true scaffold115: 5315-7705 Linum usitatissimum
Lus10004076.g 1.0kb upstream 1.0kb upstream 1000 false scaffold115: 6706-7705 Linum usitatissimum
Lus10004076.g 1.0kb downstream 1.0kb downstream 2391 true scaffold115: 4315-6705 Linum usitatissimum
Lus10004076.g 1.0kb downstream 1.0kb downstream 1000 false scaffold115: 4315-5314 Linum usitatissimum
Lus10004076.g 2.0kb upstream 2.0kb upstream 3391 true scaffold115: 5315-8705 Linum usitatissimum
Lus10004076.g 2.0kb upstream 2.0kb upstream 2000 false scaffold115: 6706-8705 Linum usitatissimum
Lus10004076.g 2.0kb downstream 2.0kb downstream 3391 true scaffold115: 3315-6705 Linum usitatissimum
Lus10004076.g 2.0kb downstream 2.0kb downstream 2000 false scaffold115: 3315-5314 Linum usitatissimum
Lus10004076.g 5.0kb upstream 5.0kb upstream 6391 true scaffold115: 5315-11705 Linum usitatissimum
Lus10004076.g 5.0kb upstream 5.0kb upstream 5000 false scaffold115: 6706-11705 Linum usitatissimum
Lus10004076.g 5.0kb downstream 5.0kb downstream 6391 true scaffold115: 315-6705 Linum usitatissimum
Lus10004076.g 5.0kb downstream 5.0kb downstream 5000 false scaffold115: 315-5314 Linum usitatissimum
Lus10004076.g 10.0kb upstream 10.0kb upstream 11391 true scaffold115: 5315-16705 Linum usitatissimum
Lus10004076.g 10.0kb upstream 10.0kb upstream 10000 false scaffold115: 6706-16705 Linum usitatissimum
Lus10004076.g 10.0kb downstream 10.0kb downstream 6705 true scaffold115: 1-6705 Linum usitatissimum
Lus10004076.g 10.0kb downstream 10.0kb downstream 5314 false scaffold115: 1-5314 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026648 5273 Angiosperm View MSA
122457354 5262 Malpighiales View MSA
124247394 5268 Malvidae View MSA
124064718 5270 Rosid View MSA
123753508 5271 Pentapetalae View MSA
122795782 5272 Eudicot View MSA
121296450 5274 Embryophyte View MSA
123428003 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain