Gene : Lus10006348.g L. usitatissimum v1.0
Defline:  (1 of 2) 2.3.3.10 - Hydroxymethylglutaryl-CoA synthase / Hydroxymethylglutaryl coenzyme alpha-condensing enzyme Genomic Order:  48
Name:  ? Lus10006348.g Secondary Identifier:  ? PAC:23178376
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-5910 Linum usitatissimum pathologic  
Lusitatissimum PWY-922 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10006348.g 0.5kb upstream 0.5kb upstream 3959 true scaffold1072: 233062-237020 Linum usitatissimum
Lus10006348.g 0.5kb upstream 0.5kb upstream 500 false scaffold1072: 233062-233561 Linum usitatissimum
Lus10006348.g 0.5kb downstream 0.5kb downstream 3959 true scaffold1072: 233562-237520 Linum usitatissimum
Lus10006348.g 0.5kb downstream 0.5kb downstream 500 false scaffold1072: 237021-237520 Linum usitatissimum
Lus10006348.g 1.0kb upstream 1.0kb upstream 4459 true scaffold1072: 232562-237020 Linum usitatissimum
Lus10006348.g 1.0kb upstream 1.0kb upstream 1000 false scaffold1072: 232562-233561 Linum usitatissimum
Lus10006348.g 1.0kb downstream 1.0kb downstream 4459 true scaffold1072: 233562-238020 Linum usitatissimum
Lus10006348.g 1.0kb downstream 1.0kb downstream 1000 false scaffold1072: 237021-238020 Linum usitatissimum
Lus10006348.g 2.0kb upstream 2.0kb upstream 5459 true scaffold1072: 231562-237020 Linum usitatissimum
Lus10006348.g 2.0kb upstream 2.0kb upstream 2000 false scaffold1072: 231562-233561 Linum usitatissimum
Lus10006348.g 2.0kb downstream 2.0kb downstream 5459 true scaffold1072: 233562-239020 Linum usitatissimum
Lus10006348.g 2.0kb downstream 2.0kb downstream 2000 false scaffold1072: 237021-239020 Linum usitatissimum
Lus10006348.g 5.0kb upstream 5.0kb upstream 8459 true scaffold1072: 228562-237020 Linum usitatissimum
Lus10006348.g 5.0kb upstream 5.0kb upstream 5000 false scaffold1072: 228562-233561 Linum usitatissimum
Lus10006348.g 5.0kb downstream 5.0kb downstream 8459 true scaffold1072: 233562-242020 Linum usitatissimum
Lus10006348.g 5.0kb downstream 5.0kb downstream 5000 false scaffold1072: 237021-242020 Linum usitatissimum
Lus10006348.g 10.0kb upstream 10.0kb upstream 13459 true scaffold1072: 223562-237020 Linum usitatissimum
Lus10006348.g 10.0kb upstream 10.0kb upstream 10000 false scaffold1072: 223562-233561 Linum usitatissimum
Lus10006348.g 10.0kb downstream 10.0kb downstream 13459 true scaffold1072: 233562-247020 Linum usitatissimum
Lus10006348.g 10.0kb downstream 10.0kb downstream 10000 false scaffold1072: 237021-247020 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122450897 5262 Malpighiales View MSA
124241910 5268 Malvidae View MSA
124060634 5270 Rosid View MSA
123746885 5271 Pentapetalae View MSA
122791824 5272 Eudicot View MSA
122042701 5273 Angiosperm View MSA
121346246 5274 Embryophyte View MSA
123424795 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain