Gene : Lus10011437.g L. usitatissimum v1.0

Defline:  (1 of 2) PF12325 - TATA element modulatory factor 1 TATA binding (TMF_TATA_bd) Genomic Order:  21
Name:  ? Lus10011437.g Secondary Identifier:  ? PAC:23182635

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10011437.g 0.5kb upstream 0.5kb upstream 6378 true scaffold1578: 97197-103574 Linum usitatissimum
Lus10011437.g 0.5kb upstream 0.5kb upstream 500 false scaffold1578: 103075-103574 Linum usitatissimum
Lus10011437.g 0.5kb downstream 0.5kb downstream 6378 true scaffold1578: 96697-103074 Linum usitatissimum
Lus10011437.g 0.5kb downstream 0.5kb downstream 500 false scaffold1578: 96697-97196 Linum usitatissimum
Lus10011437.g 1.0kb upstream 1.0kb upstream 6878 true scaffold1578: 97197-104074 Linum usitatissimum
Lus10011437.g 1.0kb upstream 1.0kb upstream 1000 false scaffold1578: 103075-104074 Linum usitatissimum
Lus10011437.g 1.0kb downstream 1.0kb downstream 6878 true scaffold1578: 96197-103074 Linum usitatissimum
Lus10011437.g 1.0kb downstream 1.0kb downstream 1000 false scaffold1578: 96197-97196 Linum usitatissimum
Lus10011437.g 2.0kb upstream 2.0kb upstream 7878 true scaffold1578: 97197-105074 Linum usitatissimum
Lus10011437.g 2.0kb upstream 2.0kb upstream 2000 false scaffold1578: 103075-105074 Linum usitatissimum
Lus10011437.g 2.0kb downstream 2.0kb downstream 7878 true scaffold1578: 95197-103074 Linum usitatissimum
Lus10011437.g 2.0kb downstream 2.0kb downstream 2000 false scaffold1578: 95197-97196 Linum usitatissimum
Lus10011437.g 5.0kb upstream 5.0kb upstream 10878 true scaffold1578: 97197-108074 Linum usitatissimum
Lus10011437.g 5.0kb upstream 5.0kb upstream 5000 false scaffold1578: 103075-108074 Linum usitatissimum
Lus10011437.g 5.0kb downstream 5.0kb downstream 10878 true scaffold1578: 92197-103074 Linum usitatissimum
Lus10011437.g 5.0kb downstream 5.0kb downstream 5000 false scaffold1578: 92197-97196 Linum usitatissimum
Lus10011437.g 10.0kb upstream 10.0kb upstream 15878 true scaffold1578: 97197-113074 Linum usitatissimum
Lus10011437.g 10.0kb upstream 10.0kb upstream 10000 false scaffold1578: 103075-113074 Linum usitatissimum
Lus10011437.g 10.0kb downstream 10.0kb downstream 15878 true scaffold1578: 87197-103074 Linum usitatissimum
Lus10011437.g 10.0kb downstream 10.0kb downstream 10000 false scaffold1578: 87197-97196 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122460380 5262 Malpighiales View MSA
124239837 5268 Malvidae View MSA
124066379 5270 Rosid View MSA
123748834 5271 Pentapetalae View MSA
122790742 5272 Eudicot View MSA
122045363 5273 Angiosperm View MSA
121349790 5274 Embryophyte View MSA
123428716 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain