Gene : Lus10011419.g L. usitatissimum v1.0
Defline:  (1 of 9) PTHR31375:SF2 - POLYGALACTURONASE/PECTINASE Genomic Order:  3
Name:  ? Lus10011419.g Secondary Identifier:  ? PAC:23182643
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-1081 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10011419.g 0.5kb upstream 0.5kb upstream 2110 true scaffold1578: 20170-22279 Linum usitatissimum
Lus10011419.g 0.5kb upstream 0.5kb upstream 500 false scaffold1578: 21780-22279 Linum usitatissimum
Lus10011419.g 0.5kb downstream 0.5kb downstream 2110 true scaffold1578: 19670-21779 Linum usitatissimum
Lus10011419.g 0.5kb downstream 0.5kb downstream 500 false scaffold1578: 19670-20169 Linum usitatissimum
Lus10011419.g 1.0kb upstream 1.0kb upstream 2610 true scaffold1578: 20170-22779 Linum usitatissimum
Lus10011419.g 1.0kb upstream 1.0kb upstream 1000 false scaffold1578: 21780-22779 Linum usitatissimum
Lus10011419.g 1.0kb downstream 1.0kb downstream 2610 true scaffold1578: 19170-21779 Linum usitatissimum
Lus10011419.g 1.0kb downstream 1.0kb downstream 1000 false scaffold1578: 19170-20169 Linum usitatissimum
Lus10011419.g 2.0kb upstream 2.0kb upstream 3610 true scaffold1578: 20170-23779 Linum usitatissimum
Lus10011419.g 2.0kb upstream 2.0kb upstream 2000 false scaffold1578: 21780-23779 Linum usitatissimum
Lus10011419.g 2.0kb downstream 2.0kb downstream 3610 true scaffold1578: 18170-21779 Linum usitatissimum
Lus10011419.g 2.0kb downstream 2.0kb downstream 2000 false scaffold1578: 18170-20169 Linum usitatissimum
Lus10011419.g 5.0kb upstream 5.0kb upstream 6610 true scaffold1578: 20170-26779 Linum usitatissimum
Lus10011419.g 5.0kb upstream 5.0kb upstream 5000 false scaffold1578: 21780-26779 Linum usitatissimum
Lus10011419.g 5.0kb downstream 5.0kb downstream 6610 true scaffold1578: 15170-21779 Linum usitatissimum
Lus10011419.g 5.0kb downstream 5.0kb downstream 5000 false scaffold1578: 15170-20169 Linum usitatissimum
Lus10011419.g 10.0kb upstream 10.0kb upstream 11610 true scaffold1578: 20170-31779 Linum usitatissimum
Lus10011419.g 10.0kb upstream 10.0kb upstream 10000 false scaffold1578: 21780-31779 Linum usitatissimum
Lus10011419.g 10.0kb downstream 10.0kb downstream 11610 true scaffold1578: 10170-21779 Linum usitatissimum
Lus10011419.g 10.0kb downstream 10.0kb downstream 10000 false scaffold1578: 10170-20169 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122448227 5262 Malpighiales View MSA
124252972 5268 Malvidae View MSA
124060937 5270 Rosid View MSA
123747300 5271 Pentapetalae View MSA
122794998 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain