Gene : Lus10017221.g L. usitatissimum v1.0
Defline:  (1 of 2) 1.3.3.3 - Coproporphyrinogen oxidase / Coproporphyrinogenase Genomic Order:  48
Name:  ? Lus10017221.g Secondary Identifier:  ? PAC:23165823
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum CHLOROPHYLL-SYN Linum usitatissimum pathologic  
Lusitatissimum HEME-BIOSYNTHESIS-II Linum usitatissimum pathologic  
Lusitatissimum PWY-5918 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10017221.g 0.5kb upstream 0.5kb upstream 34613 true scaffold117: 226065-260677 Linum usitatissimum
Lus10017221.g 0.5kb upstream 0.5kb upstream 500 false scaffold117: 226065-226564 Linum usitatissimum
Lus10017221.g 0.5kb downstream 0.5kb downstream 34613 true scaffold117: 226565-261177 Linum usitatissimum
Lus10017221.g 0.5kb downstream 0.5kb downstream 500 false scaffold117: 260678-261177 Linum usitatissimum
Lus10017221.g 1.0kb upstream 1.0kb upstream 35113 true scaffold117: 225565-260677 Linum usitatissimum
Lus10017221.g 1.0kb upstream 1.0kb upstream 1000 false scaffold117: 225565-226564 Linum usitatissimum
Lus10017221.g 1.0kb downstream 1.0kb downstream 35113 true scaffold117: 226565-261677 Linum usitatissimum
Lus10017221.g 1.0kb downstream 1.0kb downstream 1000 false scaffold117: 260678-261677 Linum usitatissimum
Lus10017221.g 2.0kb upstream 2.0kb upstream 36113 true scaffold117: 224565-260677 Linum usitatissimum
Lus10017221.g 2.0kb upstream 2.0kb upstream 2000 false scaffold117: 224565-226564 Linum usitatissimum
Lus10017221.g 2.0kb downstream 2.0kb downstream 36113 true scaffold117: 226565-262677 Linum usitatissimum
Lus10017221.g 2.0kb downstream 2.0kb downstream 2000 false scaffold117: 260678-262677 Linum usitatissimum
Lus10017221.g 5.0kb upstream 5.0kb upstream 39113 true scaffold117: 221565-260677 Linum usitatissimum
Lus10017221.g 5.0kb upstream 5.0kb upstream 5000 false scaffold117: 221565-226564 Linum usitatissimum
Lus10017221.g 5.0kb downstream 5.0kb downstream 39113 true scaffold117: 226565-265677 Linum usitatissimum
Lus10017221.g 5.0kb downstream 5.0kb downstream 5000 false scaffold117: 260678-265677 Linum usitatissimum
Lus10017221.g 10.0kb upstream 10.0kb upstream 44113 true scaffold117: 216565-260677 Linum usitatissimum
Lus10017221.g 10.0kb upstream 10.0kb upstream 10000 false scaffold117: 216565-226564 Linum usitatissimum
Lus10017221.g 10.0kb downstream 10.0kb downstream 44113 true scaffold117: 226565-270677 Linum usitatissimum
Lus10017221.g 10.0kb downstream 10.0kb downstream 10000 false scaffold117: 260678-270677 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121556309 5273 Angiosperm Singleton cluster - no MSA
122415423 5262 Malpighiales Singleton cluster - no MSA
124208396 5268 Malvidae Singleton cluster - no MSA
123926879 5270 Rosid Singleton cluster - no MSA
123506639 5271 Pentapetalae Singleton cluster - no MSA
122541723 5272 Eudicot Singleton cluster - no MSA
120828883 5274 Embryophyte Singleton cluster - no MSA
122870208 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain