Gene : Lus10000315.g L. usitatissimum v1.0

Defline:  (1 of 4) PTHR31500:SF17 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN Genomic Order:  5
Name:  ? Lus10000315.g Secondary Identifier:  ? PAC:23177775

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10000315.g 0.5kb upstream 0.5kb upstream 2430 true scaffold1889: 7698-10127 Linum usitatissimum
Lus10000315.g 0.5kb upstream 0.5kb upstream 500 false scaffold1889: 7698-8197 Linum usitatissimum
Lus10000315.g 0.5kb downstream 0.5kb downstream 2430 true scaffold1889: 8198-10627 Linum usitatissimum
Lus10000315.g 0.5kb downstream 0.5kb downstream 500 false scaffold1889: 10128-10627 Linum usitatissimum
Lus10000315.g 1.0kb upstream 1.0kb upstream 2930 true scaffold1889: 7198-10127 Linum usitatissimum
Lus10000315.g 1.0kb upstream 1.0kb upstream 1000 false scaffold1889: 7198-8197 Linum usitatissimum
Lus10000315.g 1.0kb downstream 1.0kb downstream 2930 true scaffold1889: 8198-11127 Linum usitatissimum
Lus10000315.g 1.0kb downstream 1.0kb downstream 1000 false scaffold1889: 10128-11127 Linum usitatissimum
Lus10000315.g 2.0kb upstream 2.0kb upstream 3930 true scaffold1889: 6198-10127 Linum usitatissimum
Lus10000315.g 2.0kb upstream 2.0kb upstream 2000 false scaffold1889: 6198-8197 Linum usitatissimum
Lus10000315.g 2.0kb downstream 2.0kb downstream 3930 true scaffold1889: 8198-12127 Linum usitatissimum
Lus10000315.g 2.0kb downstream 2.0kb downstream 2000 false scaffold1889: 10128-12127 Linum usitatissimum
Lus10000315.g 5.0kb upstream 5.0kb upstream 6930 true scaffold1889: 3198-10127 Linum usitatissimum
Lus10000315.g 5.0kb upstream 5.0kb upstream 5000 false scaffold1889: 3198-8197 Linum usitatissimum
Lus10000315.g 5.0kb downstream 5.0kb downstream 4918 true scaffold1889: 8198-13115 Linum usitatissimum
Lus10000315.g 5.0kb downstream 5.0kb downstream 2988 false scaffold1889: 10128-13115 Linum usitatissimum
Lus10000315.g 10.0kb upstream 10.0kb upstream 10127 true scaffold1889: 1-10127 Linum usitatissimum
Lus10000315.g 10.0kb upstream 10.0kb upstream 8197 false scaffold1889: 1-8197 Linum usitatissimum
Lus10000315.g 10.0kb downstream 10.0kb downstream 4918 true scaffold1889: 8198-13115 Linum usitatissimum
Lus10000315.g 10.0kb downstream 10.0kb downstream 2988 false scaffold1889: 10128-13115 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122450056 5262 Malpighiales View MSA
124250687 5268 Malvidae View MSA
124064410 5270 Rosid View MSA
123753724 5271 Pentapetalae View MSA
122796118 5272 Eudicot View MSA
122049850 5273 Angiosperm View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain