Gene : Lus10002321.g L. usitatissimum v1.0
Defline:  (1 of 9) PTHR31642:SF11 - SHIKIMATE O-HYDROXYCINNAMOYLTRANSFERASE Genomic Order:  22
Name:  ? Lus10002321.g Secondary Identifier:  ? PAC:23180890
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-361 Linum usitatissimum pathologic  
Lusitatissimum PWY-6040 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10002321.g 0.5kb upstream 0.5kb upstream 2064 true scaffold120: 83907-85970 Linum usitatissimum
Lus10002321.g 0.5kb upstream 0.5kb upstream 500 false scaffold120: 85471-85970 Linum usitatissimum
Lus10002321.g 0.5kb downstream 0.5kb downstream 2064 true scaffold120: 83407-85470 Linum usitatissimum
Lus10002321.g 0.5kb downstream 0.5kb downstream 500 false scaffold120: 83407-83906 Linum usitatissimum
Lus10002321.g 1.0kb upstream 1.0kb upstream 2564 true scaffold120: 83907-86470 Linum usitatissimum
Lus10002321.g 1.0kb upstream 1.0kb upstream 1000 false scaffold120: 85471-86470 Linum usitatissimum
Lus10002321.g 1.0kb downstream 1.0kb downstream 2564 true scaffold120: 82907-85470 Linum usitatissimum
Lus10002321.g 1.0kb downstream 1.0kb downstream 1000 false scaffold120: 82907-83906 Linum usitatissimum
Lus10002321.g 2.0kb upstream 2.0kb upstream 3564 true scaffold120: 83907-87470 Linum usitatissimum
Lus10002321.g 2.0kb upstream 2.0kb upstream 2000 false scaffold120: 85471-87470 Linum usitatissimum
Lus10002321.g 2.0kb downstream 2.0kb downstream 3564 true scaffold120: 81907-85470 Linum usitatissimum
Lus10002321.g 2.0kb downstream 2.0kb downstream 2000 false scaffold120: 81907-83906 Linum usitatissimum
Lus10002321.g 5.0kb upstream 5.0kb upstream 6564 true scaffold120: 83907-90470 Linum usitatissimum
Lus10002321.g 5.0kb upstream 5.0kb upstream 5000 false scaffold120: 85471-90470 Linum usitatissimum
Lus10002321.g 5.0kb downstream 5.0kb downstream 6564 true scaffold120: 78907-85470 Linum usitatissimum
Lus10002321.g 5.0kb downstream 5.0kb downstream 5000 false scaffold120: 78907-83906 Linum usitatissimum
Lus10002321.g 10.0kb upstream 10.0kb upstream 11564 true scaffold120: 83907-95470 Linum usitatissimum
Lus10002321.g 10.0kb upstream 10.0kb upstream 10000 false scaffold120: 85471-95470 Linum usitatissimum
Lus10002321.g 10.0kb downstream 10.0kb downstream 11564 true scaffold120: 73907-85470 Linum usitatissimum
Lus10002321.g 10.0kb downstream 10.0kb downstream 10000 false scaffold120: 73907-83906 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122426707 5262 Malpighiales View MSA
124250027 5268 Malvidae View MSA
124074856 5270 Rosid View MSA
123753544 5271 Pentapetalae View MSA
122797119 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain