Gene : Lus10007651.g L. usitatissimum v1.0
Defline:  (1 of 3) PTHR10314:SF123 - TRYPTOPHAN SYNTHASE BETA CHAIN-LIKE PROTEIN Genomic Order:  52
Name:  ? Lus10007651.g Secondary Identifier:  ? PAC:23140284
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum TRPSYN-PWY Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10007651.g 0.5kb upstream 0.5kb upstream 2652 true scaffold121: 241227-243878 Linum usitatissimum
Lus10007651.g 0.5kb upstream 0.5kb upstream 500 false scaffold121: 241227-241726 Linum usitatissimum
Lus10007651.g 0.5kb downstream 0.5kb downstream 2652 true scaffold121: 241727-244378 Linum usitatissimum
Lus10007651.g 0.5kb downstream 0.5kb downstream 500 false scaffold121: 243879-244378 Linum usitatissimum
Lus10007651.g 1.0kb upstream 1.0kb upstream 3152 true scaffold121: 240727-243878 Linum usitatissimum
Lus10007651.g 1.0kb upstream 1.0kb upstream 1000 false scaffold121: 240727-241726 Linum usitatissimum
Lus10007651.g 1.0kb downstream 1.0kb downstream 3152 true scaffold121: 241727-244878 Linum usitatissimum
Lus10007651.g 1.0kb downstream 1.0kb downstream 1000 false scaffold121: 243879-244878 Linum usitatissimum
Lus10007651.g 2.0kb upstream 2.0kb upstream 4152 true scaffold121: 239727-243878 Linum usitatissimum
Lus10007651.g 2.0kb upstream 2.0kb upstream 2000 false scaffold121: 239727-241726 Linum usitatissimum
Lus10007651.g 2.0kb downstream 2.0kb downstream 4152 true scaffold121: 241727-245878 Linum usitatissimum
Lus10007651.g 2.0kb downstream 2.0kb downstream 2000 false scaffold121: 243879-245878 Linum usitatissimum
Lus10007651.g 5.0kb upstream 5.0kb upstream 7152 true scaffold121: 236727-243878 Linum usitatissimum
Lus10007651.g 5.0kb upstream 5.0kb upstream 5000 false scaffold121: 236727-241726 Linum usitatissimum
Lus10007651.g 5.0kb downstream 5.0kb downstream 7152 true scaffold121: 241727-248878 Linum usitatissimum
Lus10007651.g 5.0kb downstream 5.0kb downstream 5000 false scaffold121: 243879-248878 Linum usitatissimum
Lus10007651.g 10.0kb upstream 10.0kb upstream 12152 true scaffold121: 231727-243878 Linum usitatissimum
Lus10007651.g 10.0kb upstream 10.0kb upstream 10000 false scaffold121: 231727-241726 Linum usitatissimum
Lus10007651.g 10.0kb downstream 10.0kb downstream 12152 true scaffold121: 241727-253878 Linum usitatissimum
Lus10007651.g 10.0kb downstream 10.0kb downstream 10000 false scaffold121: 243879-253878 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122459320 5262 Malpighiales View MSA
124250400 5268 Malvidae View MSA
124062384 5270 Rosid View MSA
123745831 5271 Pentapetalae View MSA
122787401 5272 Eudicot View MSA
122044231 5273 Angiosperm View MSA
121344651 5274 Embryophyte View MSA
123423776 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain