Gene : Lus10014114.g L. usitatissimum v1.0
Defline:  (1 of 5) 5.4.99.5 - Chorismate mutase / Hydroxyphenylpyruvate synthase Genomic Order:  101
Name:  ? Lus10014114.g Secondary Identifier:  ? PAC:23156865
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-3461 Linum usitatissimum pathologic  
Lusitatissimum PWY-3462 Linum usitatissimum pathologic  
Lusitatissimum PWY-3481 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10014114.g 0.5kb upstream 0.5kb upstream 1621 true scaffold1247: 464104-465724 Linum usitatissimum
Lus10014114.g 0.5kb upstream 0.5kb upstream 500 false scaffold1247: 464104-464603 Linum usitatissimum
Lus10014114.g 0.5kb downstream 0.5kb downstream 1621 true scaffold1247: 464604-466224 Linum usitatissimum
Lus10014114.g 0.5kb downstream 0.5kb downstream 500 false scaffold1247: 465725-466224 Linum usitatissimum
Lus10014114.g 1.0kb upstream 1.0kb upstream 2121 true scaffold1247: 463604-465724 Linum usitatissimum
Lus10014114.g 1.0kb upstream 1.0kb upstream 1000 false scaffold1247: 463604-464603 Linum usitatissimum
Lus10014114.g 1.0kb downstream 1.0kb downstream 2121 true scaffold1247: 464604-466724 Linum usitatissimum
Lus10014114.g 1.0kb downstream 1.0kb downstream 1000 false scaffold1247: 465725-466724 Linum usitatissimum
Lus10014114.g 2.0kb upstream 2.0kb upstream 3121 true scaffold1247: 462604-465724 Linum usitatissimum
Lus10014114.g 2.0kb upstream 2.0kb upstream 2000 false scaffold1247: 462604-464603 Linum usitatissimum
Lus10014114.g 2.0kb downstream 2.0kb downstream 3121 true scaffold1247: 464604-467724 Linum usitatissimum
Lus10014114.g 2.0kb downstream 2.0kb downstream 2000 false scaffold1247: 465725-467724 Linum usitatissimum
Lus10014114.g 5.0kb upstream 5.0kb upstream 6121 true scaffold1247: 459604-465724 Linum usitatissimum
Lus10014114.g 5.0kb upstream 5.0kb upstream 5000 false scaffold1247: 459604-464603 Linum usitatissimum
Lus10014114.g 5.0kb downstream 5.0kb downstream 6121 true scaffold1247: 464604-470724 Linum usitatissimum
Lus10014114.g 5.0kb downstream 5.0kb downstream 5000 false scaffold1247: 465725-470724 Linum usitatissimum
Lus10014114.g 10.0kb upstream 10.0kb upstream 11121 true scaffold1247: 454604-465724 Linum usitatissimum
Lus10014114.g 10.0kb upstream 10.0kb upstream 10000 false scaffold1247: 454604-464603 Linum usitatissimum
Lus10014114.g 10.0kb downstream 10.0kb downstream 11121 true scaffold1247: 464604-475724 Linum usitatissimum
Lus10014114.g 10.0kb downstream 10.0kb downstream 10000 false scaffold1247: 465725-475724 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122415750 5262 Malpighiales Singleton cluster - no MSA
124208679 5268 Malvidae Singleton cluster - no MSA
124041578 5270 Rosid View MSA
123742772 5271 Pentapetalae View MSA
122797161 5272 Eudicot View MSA
122050627 5273 Angiosperm View MSA
121312036 5274 Embryophyte View MSA
123427559 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain