Gene : Lus10009139.g L. usitatissimum v1.0
Defline:  (1 of 4) 6.1.1.9 - Valine--tRNA ligase / Valyl-tRNA synthetase Genomic Order:  36
Name:  ? Lus10009139.g Secondary Identifier:  ? PAC:23150041
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum TRNA-CHARGING-PWY Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10009139.g 0.5kb upstream 0.5kb upstream 7157 true scaffold1536: 188336-195492 Linum usitatissimum
Lus10009139.g 0.5kb upstream 0.5kb upstream 500 false scaffold1536: 194993-195492 Linum usitatissimum
Lus10009139.g 0.5kb downstream 0.5kb downstream 7157 true scaffold1536: 187836-194992 Linum usitatissimum
Lus10009139.g 0.5kb downstream 0.5kb downstream 500 false scaffold1536: 187836-188335 Linum usitatissimum
Lus10009139.g 1.0kb upstream 1.0kb upstream 7657 true scaffold1536: 188336-195992 Linum usitatissimum
Lus10009139.g 1.0kb upstream 1.0kb upstream 1000 false scaffold1536: 194993-195992 Linum usitatissimum
Lus10009139.g 1.0kb downstream 1.0kb downstream 7657 true scaffold1536: 187336-194992 Linum usitatissimum
Lus10009139.g 1.0kb downstream 1.0kb downstream 1000 false scaffold1536: 187336-188335 Linum usitatissimum
Lus10009139.g 2.0kb upstream 2.0kb upstream 8657 true scaffold1536: 188336-196992 Linum usitatissimum
Lus10009139.g 2.0kb upstream 2.0kb upstream 2000 false scaffold1536: 194993-196992 Linum usitatissimum
Lus10009139.g 2.0kb downstream 2.0kb downstream 8657 true scaffold1536: 186336-194992 Linum usitatissimum
Lus10009139.g 2.0kb downstream 2.0kb downstream 2000 false scaffold1536: 186336-188335 Linum usitatissimum
Lus10009139.g 5.0kb upstream 5.0kb upstream 11657 true scaffold1536: 188336-199992 Linum usitatissimum
Lus10009139.g 5.0kb upstream 5.0kb upstream 5000 false scaffold1536: 194993-199992 Linum usitatissimum
Lus10009139.g 5.0kb downstream 5.0kb downstream 11657 true scaffold1536: 183336-194992 Linum usitatissimum
Lus10009139.g 5.0kb downstream 5.0kb downstream 5000 false scaffold1536: 183336-188335 Linum usitatissimum
Lus10009139.g 10.0kb upstream 10.0kb upstream 16657 true scaffold1536: 188336-204992 Linum usitatissimum
Lus10009139.g 10.0kb upstream 10.0kb upstream 10000 false scaffold1536: 194993-204992 Linum usitatissimum
Lus10009139.g 10.0kb downstream 10.0kb downstream 16657 true scaffold1536: 178336-194992 Linum usitatissimum
Lus10009139.g 10.0kb downstream 10.0kb downstream 10000 false scaffold1536: 178336-188335 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122427872 5262 Malpighiales View MSA
124251995 5268 Malvidae View MSA
124073581 5270 Rosid View MSA
123752070 5271 Pentapetalae View MSA
122788218 5272 Eudicot View MSA
122045228 5273 Angiosperm View MSA
121348805 5274 Embryophyte View MSA
123424302 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain