Gene : Lus10009537.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR10108:SF708 - TOCOPHEROL O-METHYLTRANSFERASE, CHLOROPLASTIC Genomic Order:  22
Name:  ? Lus10009537.g Secondary Identifier:  ? PAC:23145733
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-1422 Linum usitatissimum pathologic  
Lusitatissimum PWY-7436 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10009537.g 0.5kb upstream 0.5kb upstream 2769 true scaffold1331: 88988-91756 Linum usitatissimum
Lus10009537.g 0.5kb upstream 0.5kb upstream 500 false scaffold1331: 88988-89487 Linum usitatissimum
Lus10009537.g 0.5kb downstream 0.5kb downstream 2769 true scaffold1331: 89488-92256 Linum usitatissimum
Lus10009537.g 0.5kb downstream 0.5kb downstream 500 false scaffold1331: 91757-92256 Linum usitatissimum
Lus10009537.g 1.0kb upstream 1.0kb upstream 3269 true scaffold1331: 88488-91756 Linum usitatissimum
Lus10009537.g 1.0kb upstream 1.0kb upstream 1000 false scaffold1331: 88488-89487 Linum usitatissimum
Lus10009537.g 1.0kb downstream 1.0kb downstream 3269 true scaffold1331: 89488-92756 Linum usitatissimum
Lus10009537.g 1.0kb downstream 1.0kb downstream 1000 false scaffold1331: 91757-92756 Linum usitatissimum
Lus10009537.g 2.0kb upstream 2.0kb upstream 4269 true scaffold1331: 87488-91756 Linum usitatissimum
Lus10009537.g 2.0kb upstream 2.0kb upstream 2000 false scaffold1331: 87488-89487 Linum usitatissimum
Lus10009537.g 2.0kb downstream 2.0kb downstream 4269 true scaffold1331: 89488-93756 Linum usitatissimum
Lus10009537.g 2.0kb downstream 2.0kb downstream 2000 false scaffold1331: 91757-93756 Linum usitatissimum
Lus10009537.g 5.0kb upstream 5.0kb upstream 7269 true scaffold1331: 84488-91756 Linum usitatissimum
Lus10009537.g 5.0kb upstream 5.0kb upstream 5000 false scaffold1331: 84488-89487 Linum usitatissimum
Lus10009537.g 5.0kb downstream 5.0kb downstream 7269 true scaffold1331: 89488-96756 Linum usitatissimum
Lus10009537.g 5.0kb downstream 5.0kb downstream 5000 false scaffold1331: 91757-96756 Linum usitatissimum
Lus10009537.g 10.0kb upstream 10.0kb upstream 12269 true scaffold1331: 79488-91756 Linum usitatissimum
Lus10009537.g 10.0kb upstream 10.0kb upstream 10000 false scaffold1331: 79488-89487 Linum usitatissimum
Lus10009537.g 10.0kb downstream 10.0kb downstream 12269 true scaffold1331: 89488-101756 Linum usitatissimum
Lus10009537.g 10.0kb downstream 10.0kb downstream 10000 false scaffold1331: 91757-101756 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458002 5262 Malpighiales View MSA
124238021 5268 Malvidae View MSA
124067151 5270 Rosid View MSA
123747323 5271 Pentapetalae View MSA
122786433 5272 Eudicot View MSA
122044817 5273 Angiosperm View MSA
121347406 5274 Embryophyte View MSA
123427925 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain