Gene : Lus10009521.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR10314:SF90 - S-SULFOCYSTEINE SYNTHASE, CHLOROPLASTIC-RELATED Genomic Order:  6
Name:  ? Lus10009521.g Secondary Identifier:  ? PAC:23145718
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum CYSTSYN-PWY Linum usitatissimum pathologic  
Lusitatissimum PWY-6936 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10009521.g 0.5kb upstream 0.5kb upstream 3275 true scaffold1331: 17936-21210 Linum usitatissimum
Lus10009521.g 0.5kb upstream 0.5kb upstream 500 false scaffold1331: 17936-18435 Linum usitatissimum
Lus10009521.g 0.5kb downstream 0.5kb downstream 3275 true scaffold1331: 18436-21710 Linum usitatissimum
Lus10009521.g 0.5kb downstream 0.5kb downstream 500 false scaffold1331: 21211-21710 Linum usitatissimum
Lus10009521.g 1.0kb upstream 1.0kb upstream 3775 true scaffold1331: 17436-21210 Linum usitatissimum
Lus10009521.g 1.0kb upstream 1.0kb upstream 1000 false scaffold1331: 17436-18435 Linum usitatissimum
Lus10009521.g 1.0kb downstream 1.0kb downstream 3775 true scaffold1331: 18436-22210 Linum usitatissimum
Lus10009521.g 1.0kb downstream 1.0kb downstream 1000 false scaffold1331: 21211-22210 Linum usitatissimum
Lus10009521.g 2.0kb upstream 2.0kb upstream 4775 true scaffold1331: 16436-21210 Linum usitatissimum
Lus10009521.g 2.0kb upstream 2.0kb upstream 2000 false scaffold1331: 16436-18435 Linum usitatissimum
Lus10009521.g 2.0kb downstream 2.0kb downstream 4775 true scaffold1331: 18436-23210 Linum usitatissimum
Lus10009521.g 2.0kb downstream 2.0kb downstream 2000 false scaffold1331: 21211-23210 Linum usitatissimum
Lus10009521.g 5.0kb upstream 5.0kb upstream 7775 true scaffold1331: 13436-21210 Linum usitatissimum
Lus10009521.g 5.0kb upstream 5.0kb upstream 5000 false scaffold1331: 13436-18435 Linum usitatissimum
Lus10009521.g 5.0kb downstream 5.0kb downstream 7775 true scaffold1331: 18436-26210 Linum usitatissimum
Lus10009521.g 5.0kb downstream 5.0kb downstream 5000 false scaffold1331: 21211-26210 Linum usitatissimum
Lus10009521.g 10.0kb upstream 10.0kb upstream 12775 true scaffold1331: 8436-21210 Linum usitatissimum
Lus10009521.g 10.0kb upstream 10.0kb upstream 10000 false scaffold1331: 8436-18435 Linum usitatissimum
Lus10009521.g 10.0kb downstream 10.0kb downstream 12775 true scaffold1331: 18436-31210 Linum usitatissimum
Lus10009521.g 10.0kb downstream 10.0kb downstream 10000 false scaffold1331: 21211-31210 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122451335 5262 Malpighiales View MSA
124240411 5268 Malvidae View MSA
124067965 5270 Rosid View MSA
123741617 5271 Pentapetalae View MSA
122788921 5272 Eudicot View MSA
122042312 5273 Angiosperm View MSA
121350970 5274 Embryophyte View MSA
123424805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain