Gene : Lus10007917.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR12358:SF43 - SPHINGOID LONG-CHAIN BASES KINASE 2, MITOCHONDRIAL Genomic Order:  63
Name:  ? Lus10007917.g Secondary Identifier:  ? PAC:23143178
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-7039 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10007917.g 0.5kb upstream 0.5kb upstream 2703 true scaffold1317: 286932-289634 Linum usitatissimum
Lus10007917.g 0.5kb upstream 0.5kb upstream 500 false scaffold1317: 286932-287431 Linum usitatissimum
Lus10007917.g 0.5kb downstream 0.5kb downstream 2703 true scaffold1317: 287432-290134 Linum usitatissimum
Lus10007917.g 0.5kb downstream 0.5kb downstream 500 false scaffold1317: 289635-290134 Linum usitatissimum
Lus10007917.g 1.0kb upstream 1.0kb upstream 3203 true scaffold1317: 286432-289634 Linum usitatissimum
Lus10007917.g 1.0kb upstream 1.0kb upstream 1000 false scaffold1317: 286432-287431 Linum usitatissimum
Lus10007917.g 1.0kb downstream 1.0kb downstream 3203 true scaffold1317: 287432-290634 Linum usitatissimum
Lus10007917.g 1.0kb downstream 1.0kb downstream 1000 false scaffold1317: 289635-290634 Linum usitatissimum
Lus10007917.g 2.0kb upstream 2.0kb upstream 4203 true scaffold1317: 285432-289634 Linum usitatissimum
Lus10007917.g 2.0kb upstream 2.0kb upstream 2000 false scaffold1317: 285432-287431 Linum usitatissimum
Lus10007917.g 2.0kb downstream 2.0kb downstream 4203 true scaffold1317: 287432-291634 Linum usitatissimum
Lus10007917.g 2.0kb downstream 2.0kb downstream 2000 false scaffold1317: 289635-291634 Linum usitatissimum
Lus10007917.g 5.0kb upstream 5.0kb upstream 7203 true scaffold1317: 282432-289634 Linum usitatissimum
Lus10007917.g 5.0kb upstream 5.0kb upstream 5000 false scaffold1317: 282432-287431 Linum usitatissimum
Lus10007917.g 5.0kb downstream 5.0kb downstream 7203 true scaffold1317: 287432-294634 Linum usitatissimum
Lus10007917.g 5.0kb downstream 5.0kb downstream 5000 false scaffold1317: 289635-294634 Linum usitatissimum
Lus10007917.g 10.0kb upstream 10.0kb upstream 12203 true scaffold1317: 277432-289634 Linum usitatissimum
Lus10007917.g 10.0kb upstream 10.0kb upstream 10000 false scaffold1317: 277432-287431 Linum usitatissimum
Lus10007917.g 10.0kb downstream 10.0kb downstream 12203 true scaffold1317: 287432-299634 Linum usitatissimum
Lus10007917.g 10.0kb downstream 10.0kb downstream 10000 false scaffold1317: 289635-299634 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122452515 5262 Malpighiales View MSA
124237255 5268 Malvidae View MSA
124062992 5270 Rosid View MSA
123747106 5271 Pentapetalae View MSA
122789016 5272 Eudicot View MSA
122043667 5273 Angiosperm View MSA
121344203 5274 Embryophyte View MSA
123380000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain