Gene : Lus10004750.g L. usitatissimum v1.0
Defline:  (1 of 6) 2.2.1.1 - Transketolase / Glycoaldehyde transferase Genomic Order:  36
Name:  ? Lus10004750.g Secondary Identifier:  ? PAC:23162952
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum CALVIN-PWY Linum usitatissimum pathologic  
Lusitatissimum NONOXIPENT-PWY Linum usitatissimum pathologic  
Lusitatissimum PENTOSE-P-PWY Linum usitatissimum pathologic  
Lusitatissimum PHOTOALL-PWY Linum usitatissimum pathologic  
Lusitatissimum PWY-5723 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10004750.g 0.5kb upstream 0.5kb upstream 3970 true scaffold2057: 153882-157851 Linum usitatissimum
Lus10004750.g 0.5kb upstream 0.5kb upstream 500 false scaffold2057: 153882-154381 Linum usitatissimum
Lus10004750.g 0.5kb downstream 0.5kb downstream 3970 true scaffold2057: 154382-158351 Linum usitatissimum
Lus10004750.g 0.5kb downstream 0.5kb downstream 500 false scaffold2057: 157852-158351 Linum usitatissimum
Lus10004750.g 1.0kb upstream 1.0kb upstream 4470 true scaffold2057: 153382-157851 Linum usitatissimum
Lus10004750.g 1.0kb upstream 1.0kb upstream 1000 false scaffold2057: 153382-154381 Linum usitatissimum
Lus10004750.g 1.0kb downstream 1.0kb downstream 4470 true scaffold2057: 154382-158851 Linum usitatissimum
Lus10004750.g 1.0kb downstream 1.0kb downstream 1000 false scaffold2057: 157852-158851 Linum usitatissimum
Lus10004750.g 2.0kb upstream 2.0kb upstream 5470 true scaffold2057: 152382-157851 Linum usitatissimum
Lus10004750.g 2.0kb upstream 2.0kb upstream 2000 false scaffold2057: 152382-154381 Linum usitatissimum
Lus10004750.g 2.0kb downstream 2.0kb downstream 5470 true scaffold2057: 154382-159851 Linum usitatissimum
Lus10004750.g 2.0kb downstream 2.0kb downstream 2000 false scaffold2057: 157852-159851 Linum usitatissimum
Lus10004750.g 5.0kb upstream 5.0kb upstream 8470 true scaffold2057: 149382-157851 Linum usitatissimum
Lus10004750.g 5.0kb upstream 5.0kb upstream 5000 false scaffold2057: 149382-154381 Linum usitatissimum
Lus10004750.g 5.0kb downstream 5.0kb downstream 8470 true scaffold2057: 154382-162851 Linum usitatissimum
Lus10004750.g 5.0kb downstream 5.0kb downstream 5000 false scaffold2057: 157852-162851 Linum usitatissimum
Lus10004750.g 10.0kb upstream 10.0kb upstream 13470 true scaffold2057: 144382-157851 Linum usitatissimum
Lus10004750.g 10.0kb upstream 10.0kb upstream 10000 false scaffold2057: 144382-154381 Linum usitatissimum
Lus10004750.g 10.0kb downstream 10.0kb downstream 13470 true scaffold2057: 154382-167851 Linum usitatissimum
Lus10004750.g 10.0kb downstream 10.0kb downstream 10000 false scaffold2057: 157852-167851 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121785053 5273 Angiosperm View MSA
122417439 5262 Malpighiales Singleton cluster - no MSA
124210162 5268 Malvidae Singleton cluster - no MSA
124075667 5270 Rosid View MSA
123757281 5271 Pentapetalae View MSA
122778345 5272 Eudicot View MSA
121056454 5274 Embryophyte View MSA
123096364 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain