Gene : Lus10005068.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR11254:SF73 - E3 UBIQUITIN-PROTEIN LIGASE TRIP12 Genomic Order:  37
Name:  ? Lus10005068.g Secondary Identifier:  ? PAC:23148986
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-7511 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10005068.g 0.5kb upstream 0.5kb upstream 7501 true scaffold1982: 180714-188214 Linum usitatissimum
Lus10005068.g 0.5kb upstream 0.5kb upstream 500 false scaffold1982: 187715-188214 Linum usitatissimum
Lus10005068.g 0.5kb downstream 0.5kb downstream 7501 true scaffold1982: 180214-187714 Linum usitatissimum
Lus10005068.g 0.5kb downstream 0.5kb downstream 500 false scaffold1982: 180214-180713 Linum usitatissimum
Lus10005068.g 1.0kb upstream 1.0kb upstream 8001 true scaffold1982: 180714-188714 Linum usitatissimum
Lus10005068.g 1.0kb upstream 1.0kb upstream 1000 false scaffold1982: 187715-188714 Linum usitatissimum
Lus10005068.g 1.0kb downstream 1.0kb downstream 8001 true scaffold1982: 179714-187714 Linum usitatissimum
Lus10005068.g 1.0kb downstream 1.0kb downstream 1000 false scaffold1982: 179714-180713 Linum usitatissimum
Lus10005068.g 2.0kb upstream 2.0kb upstream 9001 true scaffold1982: 180714-189714 Linum usitatissimum
Lus10005068.g 2.0kb upstream 2.0kb upstream 2000 false scaffold1982: 187715-189714 Linum usitatissimum
Lus10005068.g 2.0kb downstream 2.0kb downstream 9001 true scaffold1982: 178714-187714 Linum usitatissimum
Lus10005068.g 2.0kb downstream 2.0kb downstream 2000 false scaffold1982: 178714-180713 Linum usitatissimum
Lus10005068.g 5.0kb upstream 5.0kb upstream 12001 true scaffold1982: 180714-192714 Linum usitatissimum
Lus10005068.g 5.0kb upstream 5.0kb upstream 5000 false scaffold1982: 187715-192714 Linum usitatissimum
Lus10005068.g 5.0kb downstream 5.0kb downstream 12001 true scaffold1982: 175714-187714 Linum usitatissimum
Lus10005068.g 5.0kb downstream 5.0kb downstream 5000 false scaffold1982: 175714-180713 Linum usitatissimum
Lus10005068.g 10.0kb upstream 10.0kb upstream 17001 true scaffold1982: 180714-197714 Linum usitatissimum
Lus10005068.g 10.0kb upstream 10.0kb upstream 10000 false scaffold1982: 187715-197714 Linum usitatissimum
Lus10005068.g 10.0kb downstream 10.0kb downstream 17001 true scaffold1982: 170714-187714 Linum usitatissimum
Lus10005068.g 10.0kb downstream 10.0kb downstream 10000 false scaffold1982: 170714-180713 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457943 5262 Malpighiales View MSA
124237502 5268 Malvidae View MSA
124064467 5270 Rosid View MSA
123740088 5271 Pentapetalae View MSA
122794553 5272 Eudicot View MSA
122042659 5273 Angiosperm View MSA
121345958 5274 Embryophyte View MSA
123428406 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain