Gene : Lus10019841.g L. usitatissimum v1.0
Defline:  (1 of 8) 2.1.1.104 - Caffeoyl-CoA O-methyltransferase / Trans-caffeoyl-CoA 3-O-methyltransferase Genomic Order:  61
Name:  ? Lus10019841.g Secondary Identifier:  ? PAC:23163943
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-1121 Linum usitatissimum pathologic  
Lusitatissimum PWY-361 Linum usitatissimum pathologic  
Lusitatissimum PWY-7498 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10019841.g 0.5kb upstream 0.5kb upstream 1691 true scaffold1491: 285220-286910 Linum usitatissimum
Lus10019841.g 0.5kb upstream 0.5kb upstream 500 false scaffold1491: 286411-286910 Linum usitatissimum
Lus10019841.g 0.5kb downstream 0.5kb downstream 1691 true scaffold1491: 284720-286410 Linum usitatissimum
Lus10019841.g 0.5kb downstream 0.5kb downstream 500 false scaffold1491: 284720-285219 Linum usitatissimum
Lus10019841.g 1.0kb upstream 1.0kb upstream 2191 true scaffold1491: 285220-287410 Linum usitatissimum
Lus10019841.g 1.0kb upstream 1.0kb upstream 1000 false scaffold1491: 286411-287410 Linum usitatissimum
Lus10019841.g 1.0kb downstream 1.0kb downstream 2191 true scaffold1491: 284220-286410 Linum usitatissimum
Lus10019841.g 1.0kb downstream 1.0kb downstream 1000 false scaffold1491: 284220-285219 Linum usitatissimum
Lus10019841.g 2.0kb upstream 2.0kb upstream 3191 true scaffold1491: 285220-288410 Linum usitatissimum
Lus10019841.g 2.0kb upstream 2.0kb upstream 2000 false scaffold1491: 286411-288410 Linum usitatissimum
Lus10019841.g 2.0kb downstream 2.0kb downstream 3191 true scaffold1491: 283220-286410 Linum usitatissimum
Lus10019841.g 2.0kb downstream 2.0kb downstream 2000 false scaffold1491: 283220-285219 Linum usitatissimum
Lus10019841.g 5.0kb upstream 5.0kb upstream 6191 true scaffold1491: 285220-291410 Linum usitatissimum
Lus10019841.g 5.0kb upstream 5.0kb upstream 5000 false scaffold1491: 286411-291410 Linum usitatissimum
Lus10019841.g 5.0kb downstream 5.0kb downstream 6191 true scaffold1491: 280220-286410 Linum usitatissimum
Lus10019841.g 5.0kb downstream 5.0kb downstream 5000 false scaffold1491: 280220-285219 Linum usitatissimum
Lus10019841.g 10.0kb upstream 10.0kb upstream 11191 true scaffold1491: 285220-296410 Linum usitatissimum
Lus10019841.g 10.0kb upstream 10.0kb upstream 10000 false scaffold1491: 286411-296410 Linum usitatissimum
Lus10019841.g 10.0kb downstream 10.0kb downstream 11191 true scaffold1491: 275220-286410 Linum usitatissimum
Lus10019841.g 10.0kb downstream 10.0kb downstream 10000 false scaffold1491: 275220-285219 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122426079 5262 Malpighiales View MSA
124253255 5268 Malvidae View MSA
124070061 5270 Rosid View MSA
123746911 5271 Pentapetalae View MSA
122790683 5272 Eudicot View MSA
122043643 5273 Angiosperm View MSA
121346702 5274 Embryophyte View MSA
123427843 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain