Gene : Lus10004290.g L. usitatissimum v1.0
Defline:  (1 of 8) PTHR33147:SF3 - DEFENSIN-LIKE PROTEIN 6 Genomic Order:  20
Name:  ? Lus10004290.g Secondary Identifier:  ? PAC:23163600
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-2261 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10004290.g 0.5kb upstream 0.5kb upstream 882 true scaffold1884: 102852-103733 Linum usitatissimum
Lus10004290.g 0.5kb upstream 0.5kb upstream 500 false scaffold1884: 103234-103733 Linum usitatissimum
Lus10004290.g 0.5kb downstream 0.5kb downstream 882 true scaffold1884: 102352-103233 Linum usitatissimum
Lus10004290.g 0.5kb downstream 0.5kb downstream 500 false scaffold1884: 102352-102851 Linum usitatissimum
Lus10004290.g 1.0kb upstream 1.0kb upstream 1382 true scaffold1884: 102852-104233 Linum usitatissimum
Lus10004290.g 1.0kb upstream 1.0kb upstream 1000 false scaffold1884: 103234-104233 Linum usitatissimum
Lus10004290.g 1.0kb downstream 1.0kb downstream 1382 true scaffold1884: 101852-103233 Linum usitatissimum
Lus10004290.g 1.0kb downstream 1.0kb downstream 1000 false scaffold1884: 101852-102851 Linum usitatissimum
Lus10004290.g 2.0kb upstream 2.0kb upstream 2382 true scaffold1884: 102852-105233 Linum usitatissimum
Lus10004290.g 2.0kb upstream 2.0kb upstream 2000 false scaffold1884: 103234-105233 Linum usitatissimum
Lus10004290.g 2.0kb downstream 2.0kb downstream 2382 true scaffold1884: 100852-103233 Linum usitatissimum
Lus10004290.g 2.0kb downstream 2.0kb downstream 2000 false scaffold1884: 100852-102851 Linum usitatissimum
Lus10004290.g 5.0kb upstream 5.0kb upstream 5382 true scaffold1884: 102852-108233 Linum usitatissimum
Lus10004290.g 5.0kb upstream 5.0kb upstream 5000 false scaffold1884: 103234-108233 Linum usitatissimum
Lus10004290.g 5.0kb downstream 5.0kb downstream 5382 true scaffold1884: 97852-103233 Linum usitatissimum
Lus10004290.g 5.0kb downstream 5.0kb downstream 5000 false scaffold1884: 97852-102851 Linum usitatissimum
Lus10004290.g 10.0kb upstream 10.0kb upstream 10382 true scaffold1884: 102852-113233 Linum usitatissimum
Lus10004290.g 10.0kb upstream 10.0kb upstream 10000 false scaffold1884: 103234-113233 Linum usitatissimum
Lus10004290.g 10.0kb downstream 10.0kb downstream 10382 true scaffold1884: 92852-103233 Linum usitatissimum
Lus10004290.g 10.0kb downstream 10.0kb downstream 10000 false scaffold1884: 92852-102851 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029096 5273 Angiosperm View MSA
122454384 5262 Malpighiales View MSA
124245250 5268 Malvidae View MSA
124066423 5270 Rosid View MSA
123752741 5271 Pentapetalae View MSA
122796765 5272 Eudicot View MSA
121298492 5274 Embryophyte View MSA
123336463 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain