Gene : Lus10019908.g L. usitatissimum v1.0
Defline:  (1 of 1) PTHR11254:SF350 - E3 UBIQUITIN-PROTEIN LIGASE UPL4 Genomic Order:  128
Name:  ? Lus10019908.g Secondary Identifier:  ? PAC:23163994
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-7511 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10019908.g 0.5kb upstream 0.5kb upstream 8653 true scaffold1491: 621000-629652 Linum usitatissimum
Lus10019908.g 0.5kb upstream 0.5kb upstream 500 false scaffold1491: 621000-621499 Linum usitatissimum
Lus10019908.g 0.5kb downstream 0.5kb downstream 8653 true scaffold1491: 621500-630152 Linum usitatissimum
Lus10019908.g 0.5kb downstream 0.5kb downstream 500 false scaffold1491: 629653-630152 Linum usitatissimum
Lus10019908.g 1.0kb upstream 1.0kb upstream 9153 true scaffold1491: 620500-629652 Linum usitatissimum
Lus10019908.g 1.0kb upstream 1.0kb upstream 1000 false scaffold1491: 620500-621499 Linum usitatissimum
Lus10019908.g 1.0kb downstream 1.0kb downstream 9153 true scaffold1491: 621500-630652 Linum usitatissimum
Lus10019908.g 1.0kb downstream 1.0kb downstream 1000 false scaffold1491: 629653-630652 Linum usitatissimum
Lus10019908.g 2.0kb upstream 2.0kb upstream 10153 true scaffold1491: 619500-629652 Linum usitatissimum
Lus10019908.g 2.0kb upstream 2.0kb upstream 2000 false scaffold1491: 619500-621499 Linum usitatissimum
Lus10019908.g 2.0kb downstream 2.0kb downstream 10153 true scaffold1491: 621500-631652 Linum usitatissimum
Lus10019908.g 2.0kb downstream 2.0kb downstream 2000 false scaffold1491: 629653-631652 Linum usitatissimum
Lus10019908.g 5.0kb upstream 5.0kb upstream 13153 true scaffold1491: 616500-629652 Linum usitatissimum
Lus10019908.g 5.0kb upstream 5.0kb upstream 5000 false scaffold1491: 616500-621499 Linum usitatissimum
Lus10019908.g 5.0kb downstream 5.0kb downstream 13153 true scaffold1491: 621500-634652 Linum usitatissimum
Lus10019908.g 5.0kb downstream 5.0kb downstream 5000 false scaffold1491: 629653-634652 Linum usitatissimum
Lus10019908.g 10.0kb upstream 10.0kb upstream 18153 true scaffold1491: 611500-629652 Linum usitatissimum
Lus10019908.g 10.0kb upstream 10.0kb upstream 10000 false scaffold1491: 611500-621499 Linum usitatissimum
Lus10019908.g 10.0kb downstream 10.0kb downstream 18153 true scaffold1491: 621500-639652 Linum usitatissimum
Lus10019908.g 10.0kb downstream 10.0kb downstream 10000 false scaffold1491: 629653-639652 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122451618 5262 Malpighiales View MSA
124240618 5268 Malvidae View MSA
124066546 5270 Rosid View MSA
123736938 5271 Pentapetalae View MSA
122796953 5272 Eudicot View MSA
122044351 5273 Angiosperm View MSA
121310283 5274 Embryophyte View MSA
123428406 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain