Gene : Lus10005641.g L. usitatissimum v1.0
Defline:  (1 of 2) 4.2.1.70 - Pseudouridylate synthase / Uracil hydrolyase Genomic Order:  32
Name:  ? Lus10005641.g Secondary Identifier:  ? PAC:23157235
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-6019 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10005641.g 0.5kb upstream 0.5kb upstream 2705 true scaffold1721: 170054-172758 Linum usitatissimum
Lus10005641.g 0.5kb upstream 0.5kb upstream 500 false scaffold1721: 172259-172758 Linum usitatissimum
Lus10005641.g 0.5kb downstream 0.5kb downstream 2705 true scaffold1721: 169554-172258 Linum usitatissimum
Lus10005641.g 0.5kb downstream 0.5kb downstream 500 false scaffold1721: 169554-170053 Linum usitatissimum
Lus10005641.g 1.0kb upstream 1.0kb upstream 3205 true scaffold1721: 170054-173258 Linum usitatissimum
Lus10005641.g 1.0kb upstream 1.0kb upstream 1000 false scaffold1721: 172259-173258 Linum usitatissimum
Lus10005641.g 1.0kb downstream 1.0kb downstream 3205 true scaffold1721: 169054-172258 Linum usitatissimum
Lus10005641.g 1.0kb downstream 1.0kb downstream 1000 false scaffold1721: 169054-170053 Linum usitatissimum
Lus10005641.g 2.0kb upstream 2.0kb upstream 4205 true scaffold1721: 170054-174258 Linum usitatissimum
Lus10005641.g 2.0kb upstream 2.0kb upstream 2000 false scaffold1721: 172259-174258 Linum usitatissimum
Lus10005641.g 2.0kb downstream 2.0kb downstream 4205 true scaffold1721: 168054-172258 Linum usitatissimum
Lus10005641.g 2.0kb downstream 2.0kb downstream 2000 false scaffold1721: 168054-170053 Linum usitatissimum
Lus10005641.g 5.0kb upstream 5.0kb upstream 7205 true scaffold1721: 170054-177258 Linum usitatissimum
Lus10005641.g 5.0kb upstream 5.0kb upstream 5000 false scaffold1721: 172259-177258 Linum usitatissimum
Lus10005641.g 5.0kb downstream 5.0kb downstream 7205 true scaffold1721: 165054-172258 Linum usitatissimum
Lus10005641.g 5.0kb downstream 5.0kb downstream 5000 false scaffold1721: 165054-170053 Linum usitatissimum
Lus10005641.g 10.0kb upstream 10.0kb upstream 12205 true scaffold1721: 170054-182258 Linum usitatissimum
Lus10005641.g 10.0kb upstream 10.0kb upstream 10000 false scaffold1721: 172259-182258 Linum usitatissimum
Lus10005641.g 10.0kb downstream 10.0kb downstream 12205 true scaffold1721: 160054-172258 Linum usitatissimum
Lus10005641.g 10.0kb downstream 10.0kb downstream 10000 false scaffold1721: 160054-170053 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458929 5262 Malpighiales View MSA
124245189 5268 Malvidae View MSA
124062436 5270 Rosid View MSA
123743490 5271 Pentapetalae View MSA
122793573 5272 Eudicot View MSA
122043730 5273 Angiosperm View MSA
121347551 5274 Embryophyte View MSA
123427150 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain