Gene : Lus10002379.g L. usitatissimum v1.0
Defline:  (1 of 2) PTHR30525 - 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE Genomic Order:  22
Name:  ? Lus10002379.g Secondary Identifier:  ? PAC:23179416
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum PWY-7560 Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10002379.g 0.5kb upstream 0.5kb upstream 3192 true scaffold2788: 80896-84087 Linum usitatissimum
Lus10002379.g 0.5kb upstream 0.5kb upstream 500 false scaffold2788: 80896-81395 Linum usitatissimum
Lus10002379.g 0.5kb downstream 0.5kb downstream 3192 true scaffold2788: 81396-84587 Linum usitatissimum
Lus10002379.g 0.5kb downstream 0.5kb downstream 500 false scaffold2788: 84088-84587 Linum usitatissimum
Lus10002379.g 1.0kb upstream 1.0kb upstream 3692 true scaffold2788: 80396-84087 Linum usitatissimum
Lus10002379.g 1.0kb upstream 1.0kb upstream 1000 false scaffold2788: 80396-81395 Linum usitatissimum
Lus10002379.g 1.0kb downstream 1.0kb downstream 3692 true scaffold2788: 81396-85087 Linum usitatissimum
Lus10002379.g 1.0kb downstream 1.0kb downstream 1000 false scaffold2788: 84088-85087 Linum usitatissimum
Lus10002379.g 2.0kb upstream 2.0kb upstream 4692 true scaffold2788: 79396-84087 Linum usitatissimum
Lus10002379.g 2.0kb upstream 2.0kb upstream 2000 false scaffold2788: 79396-81395 Linum usitatissimum
Lus10002379.g 2.0kb downstream 2.0kb downstream 4692 true scaffold2788: 81396-86087 Linum usitatissimum
Lus10002379.g 2.0kb downstream 2.0kb downstream 2000 false scaffold2788: 84088-86087 Linum usitatissimum
Lus10002379.g 5.0kb upstream 5.0kb upstream 7692 true scaffold2788: 76396-84087 Linum usitatissimum
Lus10002379.g 5.0kb upstream 5.0kb upstream 5000 false scaffold2788: 76396-81395 Linum usitatissimum
Lus10002379.g 5.0kb downstream 5.0kb downstream 7692 true scaffold2788: 81396-89087 Linum usitatissimum
Lus10002379.g 5.0kb downstream 5.0kb downstream 5000 false scaffold2788: 84088-89087 Linum usitatissimum
Lus10002379.g 10.0kb upstream 10.0kb upstream 12692 true scaffold2788: 71396-84087 Linum usitatissimum
Lus10002379.g 10.0kb upstream 10.0kb upstream 10000 false scaffold2788: 71396-81395 Linum usitatissimum
Lus10002379.g 10.0kb downstream 10.0kb downstream 12692 true scaffold2788: 81396-94087 Linum usitatissimum
Lus10002379.g 10.0kb downstream 10.0kb downstream 10000 false scaffold2788: 84088-94087 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041406 5273 Angiosperm View MSA
122450691 5262 Malpighiales View MSA
124238446 5268 Malvidae View MSA
124066605 5270 Rosid View MSA
123736883 5271 Pentapetalae View MSA
122791920 5272 Eudicot View MSA
121344534 5274 Embryophyte View MSA
123424385 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain