Gene : Lus10032620.g L. usitatissimum v1.0
Defline:  (1 of 2) KOG0454 - 3-isopropylmalate dehydratase (aconitase superfamily) Genomic Order:  183
Name:  ? Lus10032620.g Secondary Identifier:  ? PAC:23146242
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lusitatissimum BRANCHED-CHAIN-AA-SYN-PWY Linum usitatissimum pathologic  
Lusitatissimum LEUSYN-PWY Linum usitatissimum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lus10032620.g 0.5kb upstream 0.5kb upstream 4236 true scaffold140: 1067080-1071315 Linum usitatissimum
Lus10032620.g 0.5kb upstream 0.5kb upstream 500 false scaffold140: 1067080-1067579 Linum usitatissimum
Lus10032620.g 0.5kb downstream 0.5kb downstream 4236 true scaffold140: 1067580-1071815 Linum usitatissimum
Lus10032620.g 0.5kb downstream 0.5kb downstream 500 false scaffold140: 1071316-1071815 Linum usitatissimum
Lus10032620.g 1.0kb upstream 1.0kb upstream 4736 true scaffold140: 1066580-1071315 Linum usitatissimum
Lus10032620.g 1.0kb upstream 1.0kb upstream 1000 false scaffold140: 1066580-1067579 Linum usitatissimum
Lus10032620.g 1.0kb downstream 1.0kb downstream 4736 true scaffold140: 1067580-1072315 Linum usitatissimum
Lus10032620.g 1.0kb downstream 1.0kb downstream 1000 false scaffold140: 1071316-1072315 Linum usitatissimum
Lus10032620.g 2.0kb upstream 2.0kb upstream 5736 true scaffold140: 1065580-1071315 Linum usitatissimum
Lus10032620.g 2.0kb upstream 2.0kb upstream 2000 false scaffold140: 1065580-1067579 Linum usitatissimum
Lus10032620.g 2.0kb downstream 2.0kb downstream 5736 true scaffold140: 1067580-1073315 Linum usitatissimum
Lus10032620.g 2.0kb downstream 2.0kb downstream 2000 false scaffold140: 1071316-1073315 Linum usitatissimum
Lus10032620.g 5.0kb upstream 5.0kb upstream 8736 true scaffold140: 1062580-1071315 Linum usitatissimum
Lus10032620.g 5.0kb upstream 5.0kb upstream 5000 false scaffold140: 1062580-1067579 Linum usitatissimum
Lus10032620.g 5.0kb downstream 5.0kb downstream 8736 true scaffold140: 1067580-1076315 Linum usitatissimum
Lus10032620.g 5.0kb downstream 5.0kb downstream 5000 false scaffold140: 1071316-1076315 Linum usitatissimum
Lus10032620.g 10.0kb upstream 10.0kb upstream 13736 true scaffold140: 1057580-1071315 Linum usitatissimum
Lus10032620.g 10.0kb upstream 10.0kb upstream 10000 false scaffold140: 1057580-1067579 Linum usitatissimum
Lus10032620.g 10.0kb downstream 10.0kb downstream 13736 true scaffold140: 1067580-1081315 Linum usitatissimum
Lus10032620.g 10.0kb downstream 10.0kb downstream 10000 false scaffold140: 1071316-1081315 Linum usitatissimum

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122461531 5262 Malpighiales View MSA
124238803 5268 Malvidae View MSA
124064281 5270 Rosid View MSA
123737905 5271 Pentapetalae View MSA
122792861 5272 Eudicot View MSA
122047334 5273 Angiosperm View MSA
121347218 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain